NONHSAT048514
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT048514 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1366 nt |
Genomic location |
chr15-:92691981..92874267 |
Exon number |
4 |
Exons |
92691981..92693013,92700385..92700471,92856271..92856415,92874228..92874267 |
Genome context |
|
Sequence |
000001 TGACTTCATG AGGCCTGAGG CAATGACAAA GAGCCCCCAG GGTCTTGGTC TGTCACCCAG CCTGGAGTGC AGTGGTGGGT 000080
000081 TCACAGCTCA CTGCAGCCTC AACCTATGGG CTCGCGCGAT CTTCCTATCT CAGCCTTCCA AGTAGCTGGG ACTACAGGCA 000160 000161 TGCACCACCA CACCTGGGCT GTCTGGTCCT CTGGGCAGGA ACTTGTGGAT GAAGCAGGTG TTAATAGGGT TCCATCACTG 000240 000241 GGGCACTGGG AACCCACCCT GTGCTGAGGA AGCTATCATA TGTCACTAGG AACAAAGTGA GCAAGGTGCT AAGATCTCCC 000320 000321 TTCATATCCT GTTGGGAAAT TGCTTCCTAT GAGAAGAAGA ATCCTTCTTG GCTTGAGTCA TGAAGAAACG GGGAGGGCTC 000400 000401 CGTGTGAACA CTATTGAAAG CTCTGGACAA CGCTGGGAGG GAGTCTTAGT TCTAAAGGTA CTAGCTGGGT GACCTTGAGA 000480 000481 ACACTGCCTA ATTTCTCTCG GAGCCCAGCG TGGGGCCTAA GAGGGGCTGG GCATCAGCTT TCAACCTCGC TTCCAGATGT 000560 000561 TCTGAGCACT GTTGTTGGGA TGGTCCTGTT TGGCATGACA GTGGGTCCAT TCTTCTGGGA GGGGCAAGGG CTGGTGCACA 000640 000641 TCTGTGCCCC TGTGCCAGCC TGAGACATCT GTGATGGCAA ATCAGACTAG GAAGGTGATG GAATAAAACT GTGTCTTGGA 000720 000721 CCTCTCAATA TGCACAATGC ATAGCATGCG CTTCCAGCAC AGCGTGGAGT TACAAGCCTA GGTCATTTAG GCCATCTGTG 000800 000801 GCTGATTAAT TTAGAGGGAA TCAAATATTT CCAGCAAAGC TCCAAGAGCT GTTTATCAAG CTGAGATCTG GAAGTGATTA 000880 000881 AGAATTTCAA CAAACTTTCC ATGTTTGGTA GTCACCACTA GTCAGCGTCT AGAGGCTGGG TTTTTGCAGA GGAGTCGTGG 000960 000961 GGCAAGCTAA TAAGAGACTA GTCATTTTTC ATGCTTCTCC AATGCCTTTA GTGTATGAAT ATCACAATAT AACTTCACGA 001040 001041 AAACGTCTAA TAATGAAAAA TAAACTACTC ATAAGGCAGC CACCTAAAAC CTATACATGA GATCTGATGG GTTTTGTCCA 001120 001121 AATGCATATT ATAATCATCT TCTCTAAATA GTTTTAAATT CAATAGTTCA TTTCATAAAC ACTTTCACAT TCTTAAGAAT 001200 001201 TTTCATTATT CCATGGAGCT GCAGTGCCAT AATTTAACTC ACTATTCCAA TTCAGGTTTT TCTGCTATTA TAGTTAACGT 001280 001281 TGTAATAAAA ATTTGTCTGC ATTGAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAGGG 001360 001361 GGGCCG |
Predicted Small Protein
Name | NONHSAT048514_smProtein_1001:1099 |
Length | 33 |
Molecular weight | 3946.7297 |
Aromaticity | 0.09375 |
Instability index | 80.05 |
Isoelectric point | 10.3770141602 |
Runs | 7 |
Runs residual | 0.0271045918367 |
Runs probability | 0.0375375375376 |
Amino acid sequence | MPLVYEYHNITSRKRLIMKNKLLIRQPPKTYT |
Secondary structure | LLEEEEELLLLHHHHHHHHLLHHHLLLLLLLL |
PRMN | - |
PiMo | - |