NONHSAT049676
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT049676 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1497 nt |
Genomic location |
chr15+:93426526..93441977 |
Exon number |
5 |
Exons |
93426526..93426773,93428745..93428814,93429399..93429484,93435234..93435302,93440954..93441977 |
Genome context |
|
Sequence |
000001 CTCTTCTCGC ACTGCCCCTC CGTGGTCGGG GGCCGGCTCT CGCCGGCGGG ATGCGCCTCG GTGCCCTGGG CCCGAGTCGT 000080
000081 AGGGTCCTGG GGTAGGGGGC ACGCGGGGCC CCGCTGCAGA GCCCGCGGGC GGCAGGTGGG CGGGGGGCAG CCTCGTCGCC 000160 000161 GGGACTGGAT CCGCCGGGAA AGGGGCGGCG GGTGAATGCC GGCGAGAGCC CGAAGGGGAT CGGGCGTGGA GAGCCCCTTT 000240 000241 CTGTCCTGGT GACTTAAGAG ATTAAAATTA ATTTGGTTGC TGTTGGTTCT GAACAAATAA TGAGTTCTTT TATTTGAGGT 000320 000321 ATGCCATTTT GAAGACTGAG ACGTTGGAGT TTTATCCTAG AGGATAAAGG AAATCTTTGG GAAAGTCAGT ATTTTATATA 000400 000401 GCAAAAATAT GAACCTCAAA CTGAATCCTC TAAAGGCCCC ATACAATGAA GTAGACATTG GTGGAAACAT TTACACCCAG 000480 000481 TCAGCTTGAA GAGTTTCAAA TGGACCCTAC CACTGAGAAA TCAAGATGGC AGTCTACTAT GGGGAATTGA GGAAAAATGG 000560 000561 ATTAATACAA GAGTCCTGTG ATAATATACA ACCAAGACAG GGTTCTTTTA ACATGGATTC CATGCAGTGA ATGAAGACAT 000640 000641 AGGTTTCTTA CCCAACACAA ATGGACAGTG GATTTGACTT TCTAAAGACT TTTTTTGTGG ACATTTTGAC ATTTGGAGAA 000720 000721 GAAAGATGGC ACACTAACCC AGATAATAGT TTTTATGCCT GGAATTTTTT GCAGTTTGAT TTGTATGCGT ATGACCTCTT 000800 000801 GAAATGTTAA TTTTTAATAA AATTTGTAAC ACTTAAAAAT TTCTCAGTTT GGGTTTTTTT TTTTAAGTGG AAGTTTAATT 000880 000881 AAATGTTTAG TTTTATTTTA GTAATACTTT GGCCTTTGTA GTTGCCGAGT GGTAAAGTGT ACTGAATATG AATAAAGCTG 000960 000961 GTAAATTGGA AATGGTGTAA TCGAAAACAT TTTACTTGGT TTATGAAGAT TTACGTTTTT CACAAAGTTG TGCTCTTAGA 001040 001041 TGGTCATTTG GTTTAAATAC TGTTTTGTTT GTGCTTTCAT GAAACACCTT TCAAAACAAC TCAATGGGTA ATAATAGAAT 001120 001121 CTGATTTTAA TCTGCCACAA GATTTTAATG AACTTGAAAC AAACTGCTTG TTGCTCGAAA ATTCAGGATG AGTGATACAC 001200 001201 ATATACTTCT GAATTATTTT GTGTTGATTG AAATGGTTTC TTAAGCTTTT TAATACTATA AATACATCTT GCTATAGAAT 001280 001281 ATTCATCTGA ATATTTAAAT TAATGTCTCC TATTGTCTTA CTATTAGAGG AAGAAGTGTT GGATTTATGG GTTAGGGTCC 001360 001361 TTGGAGTATT CACAATTTTT TAAATTTGAA ATTATGTGTG TAATCCATTT TATATAACTT TGAAGTAGGA TTAATATCTT 001440 001441 GTATCGTCTT TATTTTGTAC AATTGGGGAT TTAGAATAAA TGAATTGCAC CCTGCCA |
Predicted Small Protein
Name | NONHSAT049676_smProtein_1187:1243 |
Length | 19 |
Molecular weight | 2125.5061 |
Aromaticity | 0.111111111111 |
Instability index | 85.0277777778 |
Isoelectric point | 4.35198974609 |
Runs | 4 |
Runs residual | 0.0438596491228 |
Runs probability | 0.0306482953542 |
Amino acid sequence | MSDTHILLNYFVLIEMVS |
Secondary structure | LLHHHHHHHHHHHEEELL |
PRMN | - |
PiMo | - |