NONHSAT049681
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT049681 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1211 nt |
Genomic location |
chr15+:93443592..93446018 |
Exon number |
3 |
Exons |
93443592..93444054,93444397..93444529,93445404..93446018 |
Genome context |
|
Sequence |
000001 AGAGAGAGCG CGCTCTGCTC CCTGCCTTTG CCTCACTTTA CGCAACTTTC CCTAACTTTC GGGCAGCCTC AGGGGGCCCC 000080
000081 CGTAGCCCCC TGCCTTTCCT AGGGACTTAC TGGGGTCGAT TCGAACCTTT TTTTGGGAGA AAAGCAGCTT TTAGGAGCTT 000160 000161 TCTTTTCGTG CCTTGTTGGA AAGAAGCAGC CGTACTGAGA GCCCAGGTCG TTGTTTTTTC CAGCTTAGAA GCCATGGCGC 000240 000241 ACCTCCATTT TTGTGCGCTC TCCTAATGAG GTTTTTTTTC TTTCGGACCT GTTTTAGTAT TAATTATTGC TTTATTTTTT 000320 000321 TGACCAGTTA ACATATTTGA GGGTTATTTT ATTTATTTTT CGTTTTTTAA CGGAGGATTT TGCCTTTATT TTTAATTATT 000400 000401 TGGGATCTGA TATTTTTCTA CTAGTAGATA GGACTCTTGG TTTGGACATA CTACATGGAT CAGTAAATAC CTGGGCACAG 000480 000481 GACTTCAAAG CAAACACAGA TTCCCCCTCC CCCTTAATAT TTAAGAATTA AAAGATGATG AGAAATAAGG ACAAAAGCCA 000560 000561 AGAGGAGGAC AGTTCGCTAC ACAGCAATGC ATCGAGAGTC GTCTGGAATG CTTTATCTTC TGAAGCTTAA AAATGTACTG 000640 000641 TTTGTGCAAA TCATGATCTG TTTCACATTC CTTGGAGTAC CTTGTTAGTG ATGAAGTAAT AAAGCCTCTA AGATGTTTTT 000720 000721 GTTGTATGAC CTCTGTATAT TAATTTTTAA AAGTACATAT GAATGCATTT TTTGATGTGT TCTTTATGCA TTTTCATATT 000800 000801 ATAAATTTTA AATCATGCAG TTTAACAAGG ATGTGATTCA TTATGTGGTT TTCCTTCCCA ATTTTTACTT TTCTAATTTT 000880 000881 TATAAATAAT ACACTTTTCT ATTAGGCTAG TGAATTTGAA AGTTTTGAAC ATGATGTGTT ACTAATATGC TGAATTCTAT 000960 000961 TTATTTTATT TGACTGAAAG CATATTGAGC CTTGCTTTAG AAAATAAGTT ACCAAATTTT TTTGCATTGA GTTGTCACCC 001040 001041 AGTTTGTAGT GCTGTCTTAA TTGAATTGCC CATGTAAATT ACTAGATTAA ATTGAGGACA GAAAAGTTTT TTACTCATCC 001120 001121 TAAGCTGTTT TTTTCTGGAA AGTAATGACA ATTTGAAGAA ATGAGAACCT CCAGATATAT TTGGCAAATT ATTAAAGATT 001200 001201 CAGCACTAAA A |
Predicted Small Protein
Name | NONHSAT049681_smProtein_758:835 |
Length | 26 |
Molecular weight | 3084.6584 |
Aromaticity | 0.24 |
Instability index | 51.892 |
Isoelectric point | 8.02032470703 |
Runs | 4 |
Runs residual | 0.0483018867925 |
Runs probability | 0.0301625154566 |
Amino acid sequence | MNAFFDVFFMHFHIINFKSCSLTRM |
Secondary structure | LLHHHHHHHHHHEEELLLLLLLLLL |
PRMN | - |
PiMo | - |