NONHSAT050233
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT050233 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1113 nt |
Genomic location |
chr15-:96812509..96817964 |
Exon number |
3 |
Exons |
96812509..96812883,96813076..96813225,96817377..96817964 |
Genome context |
|
Sequence |
000001 CATCATTTAA TTATTATTTG TGACATTTCA ACTACATTTT AGATATTATA GAAATATATG CAAATATATG TAAAAGTATA 000080
000081 AACATAAAAA TCAGAAAGTG TTTAAAAATT ATCACATTTT ATTTTGAAAT AATATAGGAC TCACTGAAGT TGTAAAAATA 000160 000161 ATTCGGAGAG ATCCCCTGTA CCCTTCACCC GGCTTTCCCC AAAGACAGCA TTTCACATAA CCACAGCACA TTCTAAACAT 000240 000241 TAGGAAATTG ATTCAATATT GTTAACTCAG TTAGAGGCTT TATTCAGGCT TCAGCAGTTT TACATGCACT CTTTTCTGGG 000320 000321 GTGTATAATA ACATGTAGAA ATGCATAAAA CACCAGCGTT AAGAAAGCAT CTCTCACCAA TGAATATTGA TGATATGCAA 000400 000401 GATTCTCAGA CAATGTGGTT TTACGCATCT TGTGATTGAC TAAAAGAGAA GTAGAGCTGG TTGCATTTAG GAAGGTCCTT 000480 000481 TATACCTAAT TGCTTTAGCC ATACGTTAAT TAACTAATCA ATTAATCAAT CCGAATCAAG TGCCAACTAT GAGCCAGCCT 000560 000561 CTTTGATAAA GTGGAGACGC AAAGATGGAA ACTCAAATTG GATCCATATT AAAGAAGAGA AGGATGGATT TGTTTAGACA 000640 000641 ACACAAACCT AGGAAGGGTT TGAGAGGTGA AACAAACTGG GTTATGGATG AACGGGGGCA ATTGGAATGT AGAATTGAAG 000720 000721 CAGTAATTAA CATCTTGGCT TTGATAATGC ACCAACTGCA AGTGGATTCA TTGGCTCTGT GTCAGCTGGT GCATGTAGGA 000800 000801 AGCTGAAGAA TATTTTCTTG CCAACGTTTT GGCAAGACTT ATTTTTTCCC GGGGGGTGGG CGCAAGGGTG CAATCCAATA 000880 000881 ATAATTAAAA AAAAGACTGT ATAACCATTG TGTAGGAAGA GCTTCAGCCA CCCTACAGCC GAGAGCGAGT TGGTCTTCCA 000960 000961 CAAGTCACTG GGGGAGATGA AGGGTACACT GTAGTCAGGT GGAGTCTCTT TGGGCCTAAA ATCACTATAG GACACTTTTC 001040 001041 CAAAGTACCC TGGTGTCTTC AGTGATCCTG AGTGCTGGCA CTTGCACTTT GTCACTACAT CCATCCCAGA GCT |
Predicted Small Protein
Name | NONHSAT050233_smProtein_584:805 |
Length | 74 |
Molecular weight | 8452.9101 |
Aromaticity | 0.027397260274 |
Instability index | 50.2671232877 |
Isoelectric point | 9.29779052734 |
Runs | 10 |
Runs residual | 0.00715863897481 |
Runs probability | 0.0313107224872 |
Amino acid sequence | METQIGSILKKRRMDLFRQHKPRKGLRGETNWVMDERGQLECRIEAVINILALIMHQLQV DSLALCQLVHVGS |
Secondary structure | LLLLHHHHHHHHHHHHHHHLLLLLLLLLLLLEEELLLLLEEEHHHHHHHHHHHHHHHHLL LLHHHHHHHHLLL |
PRMN | - |
PiMo | - |