NONHSAT050868
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT050868 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1459 nt |
Genomic location |
chr15+:99927816..99929274 |
Exon number |
1 |
Exons |
99927816..99929274 |
Genome context |
|
Sequence |
000001 CTCTTCCTTT CAAAGGATGG CATTTTAATG TTGCTTTGCT GCCAGATGTT CATCTGCTTG CTGTGAAGTG ATTCTTTTTT 000080
000081 TAAAATGTTT TTTAATGATG TAAGTTTTCT AAAAGGCAGG GCTGAATGGA GAACCAAGAA TTTGCTTGGT AGAAAAATTA 000160 000161 TTTTTTTTTA ATTTCAGACT TATCAAAAAT TTGGTTGAGG GAATTTTTAT TAGCTGCCCT GACTTTATAA TGCTACGCTC 000240 000241 TTAACAGTGC CAAAAATCCT ACATAGTTAC TGACAAATGT GTGATCTTTT TACAGTCACA ACACCTGCTG CCCGGAAAGC 000320 000321 ACACCGTCCA CGTAGAATGG AGAAGGCAGA AAGTTACCGT GTGTTCCCAC TGTATCTGCA CTGTTCTTAC TTCCTCTTGT 000400 000401 CCCTTTTCAT ATCTTGGTCT ATTCAGCCTT AACATTTCAA AGGCTTATAG TAAAATAGGA ACTGAAGATC TGTATCAAAA 000480 000481 TGTAACACTT TCATCCTTTG GAATAATTGA AGTTTAACAT AACCTCTACA TGTATATAAG TTAGCTGGTG AAAATGTGGC 000560 000561 ATGAAACTTC ACAATTGTGC TTCAGGCCTA AGTGACTGCT ACCTATGATT TAAGTGACAG TAAATGTCTT GCTACATTTT 000640 000641 TCTATTTCAT CCTCTACAAT CATATGTCAT GGAATGGAGC TATGAAATGT GCTAACTTGG TATTCAGGAT TCTCATTGTG 000720 000721 ATAAGGTGAT ACATTAGTTT TACCTTGTTT GAAATTTTAC AAAAATGCTT ACAATCCAGG CATTCTTTCT CTACCTATTA 000800 000801 TGAACTACGG TGTGTTAAAC AACAGCAGTG GGCTGGGCAG ACAACCTTTG GGCAGTCTCA ACCTTAATCC TTGGGTACAG 000880 000881 CACCTGAACT TAATTGATGA GAAGTGGAAC TTAAGTGGTT TCCCTGGTGC TGTTCATTAT GGAAATTTTA TGCTGGATTT 000960 000961 ATCGATGTCA TTCTTAATCT TTTGATACTA TAAAGGAGTC TTACCAACTG GAGAAAATTT GCCTACATGC TATATATTTG 001040 001041 AATTGTGTCC AAAGCTTTGC AGAAAAGCAA ATCTGAAGTT ATTATATATG TTGTTTTCTT GAGCAACAGT TACACTAGGT 001120 001121 AGAAAAGTAT TCACACAATA ATAGTAATGC AAAAAAAGTG AGCTACTTGG AAAGTATCAT CTCTGTTCAG GTAAGTTTAC 001200 001201 TTCAGTGAAC TCTTGTGTGG TTAGCGATAA GTTTTAAAGT CCAGGATAGC CTCATGAGCA TAGGCCTTCC TATGAAGTAG 001280 001281 TGCAAAGGGG GCCGATTTTA GTGGATTACC CTATCAGTGT TCTTCAGTAT GTCCAATTGT TATCATACCA AAAACCTTAA 001360 001361 TTACATAACA TTGTGTGGAT GAAATGCTGC ATCTTCAGTT AATACATGTT TTGAGCACAT TCTTAAAATA CATAATAATT 001440 001441 AAATGATCCC TATTCAAAA |
Predicted Small Protein
Name | NONHSAT050868_smProtein_623:694 |
Length | 24 |
Molecular weight | 2908.4136 |
Aromaticity | 0.260869565217 |
Instability index | 65.0565217391 |
Isoelectric point | 4.50567626953 |
Runs | 5 |
Runs residual | 0.0103519668737 |
Runs probability | 0.0389683801449 |
Amino acid sequence | MSCYIFLFHPLQSYVMEWSYEMC |
Secondary structure | LEEEEEELLLLHHHHHHHHHHHL |
PRMN | - |
PiMo | - |