NONHSAT051198
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT051198 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
3102 nt |
Genomic location |
chr15-:102173460..102176561 |
Exon number |
1 |
Exons |
102173460..102176561 |
Genome context |
|
Sequence |
000001 atctttgggt gtttcttggt tcattgtggc atgggtatct tggattgcaa tcccccacca atcccagata aactcctttg 000080
000081 gagagcctat ctgtctattg ttattttagg ttttaggaca tacactaaaa aactcgttta cagcaccatt attcatagta 000160 000161 aaaaagtgga aacaacccaa atgtcccact gatgaataat acataaacaa aatgtagttc attcatataa tggaatacta 000240 000241 tttcatcaca taaaggaatg aagtactgat acacaccata aggtgaataa acctcaaaaa cacggtgcta agggaagaaa 000320 000321 gccagttaca ctttaagctg gtaaccttta cagcatataa attacttctt aataaagcgg tcttaaaaaa aaagaaacgg 000400 000401 ctcagtaacc acacatacat atgatagaag gggaacgaga gaacccagat gaaaggaaag acaggaagaa acacagtctg 000480 000481 cgaaagaaag atgaagagtt catcttgagg aaaatataat ccaagaaaca caggaaaagc ccctgcgaaa actctgtact 000560 000561 atagaacact taaGCGTatt tcttcattca gcgaaagtac tgagccccta tgtggcatgc accctcctga gccctgggga 000640 000641 tttagcacta agctaagttc ttcctttcat gaagcatgtc atattcttgt gcacaaaaat ataagcaCAA AGAGAtgatt 000720 000721 ccactgaacc cccgcccctc cccatcaagc agggaacgtt gatttgtcca cactggaata gatgcttact ttgaacacgg 000800 000801 attcgccttc tctAgcttta ttcactgttt cacacaagat tgcttctgat caaagaattt atttcacagt aaaagaaatg 000880 000881 tggcaccaaa agtgagttca tgctGAGAAA GTGGAAAATG GCCCTGATAG TAGCCAGGCT GTGATTTTAA TCACTAAATA 000960 000961 TAAAAAATGC TCACAGATTG CAAACAGTAt tccttttttc tccctagttt cttaaggtag atgcttgggt cactaatttg 001040 001041 agacatttct ccttttctaa tataagtatt ataagtaatg ctataaattt ccgtctgaac tttgagaaca tttcacaaat 001120 001121 tctattatgt ataatttaaa atattttata atttcacttt tgaattcctt ttggtcaaaa gatttatatt attattattg 001200 001201 agacagggtc ttgctctgtc acccaagctg gagtgcagag gcacgatctc agttcactgc aatctccacc tcccaggctc 001280 001281 aagagattct cccaccttag cctcccgggt agctgggacc acaggtctgc atcaccatgg tgggctaatt tttaaatttt 001360 001361 tttctagagg tagggtccca ctatgttgcc caggcttgtc ttgaaccctt gggctcaagt gagcctcctg ccttggcctc 001440 001441 ccaaactgct gggattacag gcataagcca ctgcacctgg cccaaaagat aatttttaaa taaagcattt aaagataatt 001520 001521 gtttaaatga gttattggtc ttaaaaatgt cctcaaagac attttcaaga tatatttttg tacttagttt gtagctggtt 001600 001601 ttcactgtgg taagagaata aaatttgtat tattttagtt attttaaatt tgttgatttg ctttatggct cacatacggt 001680 001681 ctatcatgct gaatgttaca tgtgcacttg aaaataatgt gtattccact ggtccaggtc atgtgtttta tcagtgacga 001760 001761 ttaggtcaat ttgcttgata gtatttttca gcatttttct atctttgcca atattccgtg ttcttattct gtcaattact 001840 001841 gacagagaaa tgttgcagtc tccaactcta atggtggctt tctgtatttc tcttttcagt tttttgtttg tttgtttgtt 001920 001921 tgtttgagat ggagtcttgc tctgtcgccc aggctggagt gcagtgctgc gatctcggct cactgcaacc tccacctccc 002000 002001 aggctcaagc aattctcctg cctcagcctc ctgagtagct gggattacag gcatgcacca ccacacctgg ctaatttttg 002080 002081 tatttttagt agagacggtg ttttgccatg ttagccaggc tggtcttgaa ctcctggcct caagtaatcc acctgcttcg 002160 002161 gcctcccaaa gtgctgggat tacaggcatg agtccccatg cctggcccag actggacatt tctattgata tgcttttgag 002240 002241 ttcatcgatt tttcgttcct ctatcatctc ttgtccacta ctgaggcagc ccagtgagtt tttaatttca attattatat 002320 002321 tttttgttac ataatttccc ttggtacctt tttatatctt ctatttattt tctactttct atttgtatta agagtgttag 002400 002401 taattgctca gtgaggcatt ttcatgatag ttgctttaaa attcttgtca ggtaatccca atgtctgagt cttctcaacg 002480 002481 ctggcacctt ttgatcatct cttctcaatc aagttgtgaa tgtcctggtt cttggtatat ggatttttta ttgtctcctg 002560 002561 gacatgttgg atattatgtc ataagaacta attgtttttt cttttaaatt cttcttcttt ttgggtatag tctgcaggcc 002640 002641 caggTGGGGC TTCATGTTCA GCTCACTGTT GGACTTCATT GACATCACCC TGAAAAAGGT GGATTTTTGA GGAGCGTGAG 002720 002721 AAGAAGAGCA TGAGAAGTGC TGAATTACAC TGTGTTGTTG CAGATGAGCG TCCCTAACCA CAGCAGTcct tgaagaagaa 002800 002801 agatggtctg ataggaactg cttattcagg aacacattgc aaaatctgtg ggtgtccttc gggatctgag ggcctcactc 002880 002881 ctacaactgc aaggaattga attcttctaa cagtgtgatg aggttggaag aagactccaa gatccagaaa ggaacacagt 002960 002961 cccaccaaca cctgtgttgt aacctggtga caccctgaaa cagagaatcc agctaagcga tgcccaaaat attcatccac 003040 003041 aacgtgttgt tttaagcttc caagtttcta gtaatttgtt ataaagcaat agaaaagtaa ta |
Predicted Small Protein
Name | NONHSAT051198_smProtein_1928:2113 |
Length | 62 |
Molecular weight | 6678.6785 |
Aromaticity | 0.0819672131148 |
Instability index | 59.2180327869 |
Isoelectric point | 6.67437744141 |
Runs | 10 |
Runs residual | 0.0111173921236 |
Runs probability | 0.0402225755167 |
Amino acid sequence | MESCSVAQAGVQCCDLGSLQPPPPRLKQFSCLSLLSSWDYRHAPPHLANFCIFSRDGVLP C |
Secondary structure | LLLLHHHHLLEEELLLLLLLLLLLLLLEEEEHHHLLLLLLLLLLLLLLLEEEEELLLLLL L |
PRMN | - |
PiMo | - |