NONHSAT051713

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT051713

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1644 nt

Genomic location

chr15+:102506270..102516746

Exon number

10

Exons

102506270..102506426,102512799..102512897,102513104..102513250,102513423..102513555,102513795..102513930,102514108..102514287,102514398..102514556,102515216..102515368,102516127..102516195,102516336..102516746

Genome context

Sequence
000001 CAGGCACCAT GACTCCTGTG AGGATGCAGC ACTCCCTGGC AGGTCAGACC TATGCCGTGC CCCTCATCCA GCCAGACCTG 000080
000081 CGGCGAGAGG AGGCCGTCCA GCAGATGGCG GATGCCCTGC AGTACCTGCA GAAGGTCTCT GGAGACATCT TCAGCAGGTA 000160
000161 GAGCAGAGCC GGAGCCAGGT GCAGGCCATT GGAGAGAAGG TCTCCTTGGC CCAGGCCAAG ATTGAGAAGA TCAAGGGCAG 000240
000241 CAAGAAGGCC ATCAAGGTGT TCTCCAGTGC CAAGTACCCT GCTCCAGAGC GCCTGCAGGA ATATGGCTCC ATCTTCACGG 000320
000321 GCGCCCAGGA CCCTGGCCTG CAGAGACGCC CCCGCCACAG GATCCAGAGC AAGCACCGCC CCCTGGACGA GCGGGCCCTG 000400
000401 CAGGAGAAGC TGACTTTCCT GTGTGCGTGA GCACCAAGCC GGAGCCCGAG GACGATGCAG AAGAGGGACT TGGGGGTCTT 000480
000481 CCCAGCAACA TCAGCTCTGT CAGCTCCTTG CTGCTCTTCA ACACCACCGA GAACCTGTAG AAGAAGTATG TCTTCCTGGA 000560
000561 CCCCCTGGCT GGTGCTGTAA CAAAGACCCA TGTGATGCTG GGGGCAGAGA CAGAGGAGAA GCTGTTTGAT GCCCCCTTGT 000640
000641 CCATCAGCAA GAGAGAGCAG CTGGAACAGC AGGTCCCAGA GAACTACTTC TATGTGCCAG ACCTGGGCCA GGTGCCTGAG 000720
000721 ATTGATGTTC CATCCTACCT GCCTGACCTG CCCGGCATTA CCAACGACCT CATGTACATT GCTGACCTGG GCCCCGGCAT 000800
000801 TGCCCCCTCT GCCCCTGGCA CCATTCCAGA ACTGCCCACC TTCCACACTG AGACCTACAA GATGGGGTac taacaccacc 000880
000881 cccaccgccc ccaccaccac ccccaGCTCC TGAGGTGCTG GCCAGTGCAC CCCCACTCCC ACCCTCAACC GCGGCCCCTG 000960
000961 TAGGCCAAGG CGCCAGGCAG GACGACAGCA GCAGCAGCGC GTCTCCTTCA GTCCAGGGAG CTCCCAGGGA AGTGGTTGAC 001040
001041 CCCTCCGGTG GCCGGGCCAC TCTGCTAGAG TCCATCCGCC AAGCTGGGGG CATCGGCAAG GCCAAGCTGC GCAGCATGAA 001120
001121 GGAGCGAAAG CTGGAGAAGA AGCAGCAGAA GGAGCAGGAG CAAGTGAGAG CCACGAGCCA AGGTGGGCAC TTGATGTCGG 001200
001201 ATCTCTTCAA CAAGCTGGTC ATGAGGCGCA AGGGCATCTC TGGGAAAGGA CCTGGGGCTG GTGAGGGGCC CGGAGGAGCC 001280
001281 TTTGCCCGCG TGTCAGACTC CATCCCTCCT CTGCCGCCAC CGCAGCAGCC ACAGGCAGAG GAGGACGAGG ACGACTGGGA 001360
001361 ATCCTAGGGG GCTCCATGAC ACCTTCCCCC CCAGACCCAG ACTTGGGCCG TTGCTCTGAC ATGGACACAG CCAGGACAAG 001440
001441 CTGCTCAGAC CTACTTCCTT GGGAGGGGGT GACGGAACCA GCACTGTGTG GAGACCAGCT TCAAGGAGCG GAAGGCTGGC 001520
001521 TTGAGGCCAC ACAGCTGGGG CGGGGACTTC TGTCTGCCTG TGCTCCATGG GGGGACGGCT CCACCCAGCC TGCGCCACTG 001600
001601 TGTTCTTCTC TTAAGAGGCT TCCAGAGAAA ACGGCACACC AATC
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Predicted Small Protein

Name NONHSAT051713_smProtein_1115:1366
Length 84
Molecular weight 9128.0942
Aromaticity 0.0361445783133
Instability index 62.8698795181
Isoelectric point 5.81158447266
Runs 9
Runs residual 0.031593038822
Runs probability 0.0490686765197
Amino acid sequence MKERKLEKKQQKEQEQVRATSQGGHLMSDLFNKLVMRRKGISGKGPGAGEGPGGAFARVS
DSIPPLPPPQQPQAEEDEDDWES
Secondary structure LLHHHHHHHHHHHHHHHHHHLLLLLHHHHHHHLLEEEELLLLLLLLLLLLLLLLEEEEEL
LLLLLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -