NONHSAT051713
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Contents
[hide]Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT051713 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1644 nt |
Genomic location |
chr15+:102506270..102516746 |
Exon number |
10 |
Exons |
102506270..102506426,102512799..102512897,102513104..102513250,102513423..102513555,102513795..102513930,102514108..102514287,102514398..102514556,102515216..102515368,102516127..102516195,102516336..102516746 |
Genome context |
|
Sequence |
000001 CAGGCACCAT GACTCCTGTG AGGATGCAGC ACTCCCTGGC AGGTCAGACC TATGCCGTGC CCCTCATCCA GCCAGACCTG 000080
000081 CGGCGAGAGG AGGCCGTCCA GCAGATGGCG GATGCCCTGC AGTACCTGCA GAAGGTCTCT GGAGACATCT TCAGCAGGTA 000160 000161 GAGCAGAGCC GGAGCCAGGT GCAGGCCATT GGAGAGAAGG TCTCCTTGGC CCAGGCCAAG ATTGAGAAGA TCAAGGGCAG 000240 000241 CAAGAAGGCC ATCAAGGTGT TCTCCAGTGC CAAGTACCCT GCTCCAGAGC GCCTGCAGGA ATATGGCTCC ATCTTCACGG 000320 000321 GCGCCCAGGA CCCTGGCCTG CAGAGACGCC CCCGCCACAG GATCCAGAGC AAGCACCGCC CCCTGGACGA GCGGGCCCTG 000400 000401 CAGGAGAAGC TGACTTTCCT GTGTGCGTGA GCACCAAGCC GGAGCCCGAG GACGATGCAG AAGAGGGACT TGGGGGTCTT 000480 000481 CCCAGCAACA TCAGCTCTGT CAGCTCCTTG CTGCTCTTCA ACACCACCGA GAACCTGTAG AAGAAGTATG TCTTCCTGGA 000560 000561 CCCCCTGGCT GGTGCTGTAA CAAAGACCCA TGTGATGCTG GGGGCAGAGA CAGAGGAGAA GCTGTTTGAT GCCCCCTTGT 000640 000641 CCATCAGCAA GAGAGAGCAG CTGGAACAGC AGGTCCCAGA GAACTACTTC TATGTGCCAG ACCTGGGCCA GGTGCCTGAG 000720 000721 ATTGATGTTC CATCCTACCT GCCTGACCTG CCCGGCATTA CCAACGACCT CATGTACATT GCTGACCTGG GCCCCGGCAT 000800 000801 TGCCCCCTCT GCCCCTGGCA CCATTCCAGA ACTGCCCACC TTCCACACTG AGACCTACAA GATGGGGTac taacaccacc 000880 000881 cccaccgccc ccaccaccac ccccaGCTCC TGAGGTGCTG GCCAGTGCAC CCCCACTCCC ACCCTCAACC GCGGCCCCTG 000960 000961 TAGGCCAAGG CGCCAGGCAG GACGACAGCA GCAGCAGCGC GTCTCCTTCA GTCCAGGGAG CTCCCAGGGA AGTGGTTGAC 001040 001041 CCCTCCGGTG GCCGGGCCAC TCTGCTAGAG TCCATCCGCC AAGCTGGGGG CATCGGCAAG GCCAAGCTGC GCAGCATGAA 001120 001121 GGAGCGAAAG CTGGAGAAGA AGCAGCAGAA GGAGCAGGAG CAAGTGAGAG CCACGAGCCA AGGTGGGCAC TTGATGTCGG 001200 001201 ATCTCTTCAA CAAGCTGGTC ATGAGGCGCA AGGGCATCTC TGGGAAAGGA CCTGGGGCTG GTGAGGGGCC CGGAGGAGCC 001280 001281 TTTGCCCGCG TGTCAGACTC CATCCCTCCT CTGCCGCCAC CGCAGCAGCC ACAGGCAGAG GAGGACGAGG ACGACTGGGA 001360 001361 ATCCTAGGGG GCTCCATGAC ACCTTCCCCC CCAGACCCAG ACTTGGGCCG TTGCTCTGAC ATGGACACAG CCAGGACAAG 001440 001441 CTGCTCAGAC CTACTTCCTT GGGAGGGGGT GACGGAACCA GCACTGTGTG GAGACCAGCT TCAAGGAGCG GAAGGCTGGC 001520 001521 TTGAGGCCAC ACAGCTGGGG CGGGGACTTC TGTCTGCCTG TGCTCCATGG GGGGACGGCT CCACCCAGCC TGCGCCACTG 001600 001601 TGTTCTTCTC TTAAGAGGCT TCCAGAGAAA ACGGCACACC AATC |
Predicted Small Protein
Name | NONHSAT051713_smProtein_1115:1366 |
Length | 84 |
Molecular weight | 9128.0942 |
Aromaticity | 0.0361445783133 |
Instability index | 62.8698795181 |
Isoelectric point | 5.81158447266 |
Runs | 9 |
Runs residual | 0.031593038822 |
Runs probability | 0.0490686765197 |
Amino acid sequence | MKERKLEKKQQKEQEQVRATSQGGHLMSDLFNKLVMRRKGISGKGPGAGEGPGGAFARVS DSIPPLPPPQQPQAEEDEDDWES |
Secondary structure | LLHHHHHHHHHHHHHHHHHHLLLLLHHHHHHHLLEEEELLLLLLLLLLLLLLLLEEEEEL LLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |