NONHSAT051823

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT051823

Source

NONCODE4.0

Same with

,

Classification

sense

Length

522 nt

Genomic location

chr16+:712275..713437

Exon number

3

Exons

712275..712331,712673..712844,713145..713437

Genome context

Sequence
000001 GCGCCTGTGG GCCGTGGGGG CTGTGTCGGA GCTGAGGTGC AAGGGCTCAG GCGCCAGGTC CAGTTCTGTG TTCATGGAAC 000080
000081 ACGAGCTGGT GCTGGACGGG GCTGTGGTGA GTGCCAGCTT CGATGACAGC GTGGACATGG GCGTCGTGGG CACCACGGCG 000160
000161 GGCACGCTGT GGTTTGTCAG CTGGGCCGAG GGCACCAGCA CACGTCTCAT CAGTGGCCAC AGGAGCAAGA AATCACATCA 000240
000241 GTccgggcgt ggtggttcat gcctgtgatc ccagcactct gggaggccaa ggcaggtgga tcacctgagg tcaggagttc 000320
000321 gagaccagcc tggtcaacat ggcgaaatcc catctctact gaaaatacaa aaattagccg ggcctcttga tgtatacctg 000400
000401 taatcccagc tactctggag gctgagacaa gagaatcgct tgaacccagg aggcagaggt tgcagtgaac caagattgca 000480
000481 ccactgcact ccagcctggg cgacagagac tccatctcaa ag
[back to top]

Predicted Small Protein

Name NONHSAT051823_smProtein_122:307
Length 62
Molecular weight 6378.1708
Aromaticity 0.0655737704918
Instability index 56.2409836066
Isoelectric point 11.7002563477
Runs 10
Runs residual 0.0111173921236
Runs probability 0.0284578696343
Amino acid sequence MTAWTWASWAPRRARCGLSAGPRAPAHVSSVATGARNHISPGVVVHACDPSTLGGQGRWI
T
Secondary structure LLLEEELLLLLLLLLLLLLLLLLLLLEEEHHHLLLLLLLLLLEEEEEELLLLLLLLLEEE
L
PRMN -
PiMo -