NONHSAT051823
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT051823 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
522 nt |
Genomic location |
chr16+:712275..713437 |
Exon number |
3 |
Exons |
712275..712331,712673..712844,713145..713437 |
Genome context |
|
Sequence |
000001 GCGCCTGTGG GCCGTGGGGG CTGTGTCGGA GCTGAGGTGC AAGGGCTCAG GCGCCAGGTC CAGTTCTGTG TTCATGGAAC 000080
000081 ACGAGCTGGT GCTGGACGGG GCTGTGGTGA GTGCCAGCTT CGATGACAGC GTGGACATGG GCGTCGTGGG CACCACGGCG 000160 000161 GGCACGCTGT GGTTTGTCAG CTGGGCCGAG GGCACCAGCA CACGTCTCAT CAGTGGCCAC AGGAGCAAGA AATCACATCA 000240 000241 GTccgggcgt ggtggttcat gcctgtgatc ccagcactct gggaggccaa ggcaggtgga tcacctgagg tcaggagttc 000320 000321 gagaccagcc tggtcaacat ggcgaaatcc catctctact gaaaatacaa aaattagccg ggcctcttga tgtatacctg 000400 000401 taatcccagc tactctggag gctgagacaa gagaatcgct tgaacccagg aggcagaggt tgcagtgaac caagattgca 000480 000481 ccactgcact ccagcctggg cgacagagac tccatctcaa ag |
Predicted Small Protein
Name | NONHSAT051823_smProtein_122:307 |
Length | 62 |
Molecular weight | 6378.1708 |
Aromaticity | 0.0655737704918 |
Instability index | 56.2409836066 |
Isoelectric point | 11.7002563477 |
Runs | 10 |
Runs residual | 0.0111173921236 |
Runs probability | 0.0284578696343 |
Amino acid sequence | MTAWTWASWAPRRARCGLSAGPRAPAHVSSVATGARNHISPGVVVHACDPSTLGGQGRWI T |
Secondary structure | LLLEEELLLLLLLLLLLLLLLLLLLLEEEHHHLLLLLLLLLLEEEEEELLLLLLLLLEEE L |
PRMN | - |
PiMo | - |