NONHSAT052091

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT052091

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

6088 nt

Genomic location

chr16+:2318505..2324592

Exon number

1

Exons

2318505..2324592

Genome context

Sequence
000001 GCGGGGTGGT AGCACAGGAG GGGTTCGCAG GCTCTGCGGC CGTGCGTGGC GGGGCGTGGG GGCCCGCAGG GCGGAAGTAG 000080
000081 CTCGGAGAGA CGGGCTGGGG CAGGGCGTGC GTTCGTGCGG TCAAAATCCA CTGGTGGCGT TTGGGGTGTT CCCGTGGACG 000160
000161 CGGCCTCCCG GCAGGCGGAC CTCCACCGGG TGGGCGCGGC AGGCGGGCTG TGCGGGCAGG AAGAGCGACG AGCTTGAGAG 000240
000241 TGGGAGATGG GGTGCAACGG CGGGCCTCTC CGGGGAGGTG ACACTGCCGC TGAGACCCGA ATGGAAGGGC GCGCCCGGCG 000320
000321 GGGGAACAGC AGGCGCCGAG GTTCGCTGGA AGCAGGGAAG GGAGGCCCGG GTACCGGCTC GCAGGCCCGC GCGAGCTTCG 000400
000401 CGGCAGCGGC ACGGAGCGTG TGAACGGCGC AGCGCCGAGG CTTCATCCAT CGGCCGGTGC AGGGTCCGGG CAGGGAGCAC 000480
000481 TGTCGACCAG GGTCCGACCC TGGGAGAGTC CAGAGGTGGC GCCTCTGGCA GGGACAGAGG AGGGGGTGAC GCTGTAGGGG 000560
000561 TGCAGGCAGG AGGCTCCGCG TCAACTCCCC ACACTGACGG GGCGGAtttt tttttttttt tgacagagtc tcgcactgtt 000640
000641 gcccaggctg gagtgcagcg gcgcgatctc ggctcactgc aacctccgcc tcccgggttc aagcgattct cctgcctcag 000720
000721 cctcccgagt agctgggatt acaggcgcac actaccacac ccggctaatt ttttttgtat ttttctggta gagacagggt 000800
000801 ttcactatgt tggccagact ggtcgagaac tcctgacctc gtgatccgct cctaggttcg ccttggcctc ccaaagtgct 000880
000881 cgctcctggg cgtcccaaag tgctgggatt acaggcgtga gccaccgccc ccggccGAGG GCGGGTTTTG TTCTCTGCTG 000960
000961 TGCCTGTCAG GCAGTCGTTG CCCTGTGGTT ATTTGTGGAG GGATTGACGG TGCGCTGAGC TTCAGACTTT GTCTGAACAG 001040
001041 CTTCGTGGCA GCAAGGAAGG GAGAAGGGAA CAGATCCAAG CCGATCTTTG GGAGGAGAGA ACCAGCATGA CTTGGAGACT 001120
001121 TTAGATGTCA GAGCAAAGGA CAGGGTGCAG CTTGGTGACC CGGAGTGGGT GGGTGGGTGA ATGGATGGAT AGATAGTGGG 001200
001201 GATGTGGTCT GCCATCACTG CCCTCTTCCC TGTGTGGGAA GCCAGCTCTT GGTGACTTCC TGCCGAGACC CACTCCCTCT 001280
001281 GGCCCTGTCC GAGGGTGTCA AGTGTGCCCT TGACCCTTCA CCCTGGGCTA AGGGATGTCC AAGGAGTTGG GGACAAAGGC 001360
001361 AGCTAGGAGG AGGAGCTACC TCCCGAGTCT GCTGCAGTAA GTCACCAGTG TGTTCCTGTG GGTGGAGGCT GGCAGGCCCA 001440
001441 TCAGTCTGGT TTGGGTACCC GTTGGATTTG GGTTTGATGA CATGTAAAGT GAGTTAGAGT CTCTGCATTA CTGTCACACC 001520
001521 TGCTGTGCCC AGGCATGGAA GATTAAGTGG AACAGAGGGG CCGCCCCCCT GCTGAAGGGG CCCCAGAGTC GGCGCTAGGG 001600
001601 GAGGGGGCAG CCTCGGTGGT CCAGGCAGGC ATAGGCGGAA TTCTCTGAGG TGGCATTGGA GTCCAGTGGT CAGAGGTGCT 001680
001681 AAAAGGCCCC AAACCTAGAG CCCATGCCCA GGGCCCCACT GACACCTGGT GGGCAGGGGC AGCCTGGTGA CCCCACATGA 001760
001761 CATGGGTGGG CGTGACGCAG CACCAGCTGG GCCGACAGCC CTCCCCCTGC TGGTTTTTAA TGCTCTGCAG TAATGTCATT 001840
001841 TGGCCTGCGA ATAAGCTTTC ACACATTTTA TATTAAATCT ACAAGTATGA TTTATTCAGG CACTTACGAA TTTAATCAAA 001920
001921 TTTGTTTCTA AATATTACTG ATTTTTGTTA TCAAATGTGC CATCAGCTGT TGAGCTTTGA GAATTGAGCA TCCTGGCTTT 002000
002001 TGCCATTTTG AGGATCAGCA GAAGCATGTC TGGAAGAAAT GTGAGAAAAT AAAACTCAGG AGCCTACCCC CACCCTGCCC 002080
002081 TTCCAGGAGC TCAGCCCCAG AGCCAGGCTG CTAAGGCCAT GGAGGCTGAG GGCAGTGGAG CTGGGGTTTC TGGAGCCTCA 002160
002161 GGGGCCCTGG TTTGCTGGAA GGGCAGGCAG GGCTTCATGG AGGGCATTAG GCAGTGGCCA GAGCCCTGCA GTGCTGGGCA 002240
002241 TGGGCTTCTC GTGGGCTCTG GCCACGGCCC TGAGCTCCTC CCCTTACCTT CCCAGAGCGG AGGGTCACCT GCTGAGCTGG 002320
002321 GCACGGGCTT CTCGTGGGCT CTGGCCACGG CCCTGAGCTC CTCCCCTTGC CTTCCCAGAG CGGAGGGTCA CCTGCTGACA 002400
002401 GTTTGGGGCG GCTCTGTCTT TGAGAGCATG CCCTCATGAA GGCAGAATGT CCTCCCTGCC TCCATCCTCT GTGGCCCGGT 002480
002481 GGCTCCTGCA GTGCCTGCCC TCAGAGGCTG GTGGCCTGGG ACACAGGGAT GAGGATGGGC TTGGTGGTGC TGCAGGTCAC 002560
002561 AGTGGGTCAT GAAGGAGCTT TGGGGGTGTT GCATTCTCTG GTAAAGCACA GCAAGGGAGC CCTTTTACCC ACTACTAAAA 002640
002641 CCTGGCTCTG CACTGAGGCC ATGCGCAGCC CAGTCAGGTG GACGAGGGGG TAACGACTGG ACCGTGGGGA GGCATCAGAG 002720
002721 GAGGAGCTGC TGAGAGGCGG GTCACCACAG CCTGGTGCCT GTCTGGAGAG GGTGGGGCTG GGGGAGGTGC TGGCCAGGTC 002800
002801 CATGGGGGTG GCCAGGCTGG GTCTGAAAGG GCCTTGCGCT GGTGTGGGGT GAGCTTGGTC TGTTGGGAGA GTATGCAGTT 002880
002881 CATTGGGGCC TCCCTGGCTC CAGGTTTGCA TGTCTGAGGA GTGGGTATCA TCAGGGCCTG GGGCCTCTCC AGTGGGCATG 002960
002961 TCTGAACTCT CCCAGGGTTG GGAGCCTGTG CTCATCACAA GCTCAAAGCA CTCCATTTCT GCTACCATGA AGTCAAGGAT 003040
003041 GGTGACTGTG AGCCGCCTGG GACCTGAGCT GCCTGGGACT GTGACTGAGG CACCCGGGGT GCCTCTTAGG GCCTTGGGTT 003120
003121 TGGGCCCATG GCTAGATGAG CCTTGGTGAT TCTGTGGTAT TGCCTGGGCC AGGTGGACCC AGGGGCAGCT GCGGCTAGTC 003200
003201 CATTTGGAGC TCCTTCAAGC CGAAGCATCC AACACCAGTG TCTGTGAGGT GTGGGCCCGG CCCCAGGAGC GGGGCCTGGG 003280
003281 CAGCCCCGTG TGTTGAGGAA GGAAGGCAGG GCCCCCGCTC CCCGGGCCTG ACCCCACTGC TTCAGCCCCC TCCTGCCTGC 003360
003361 CTACAGCCTG GCCTCGAGGG CCCATCAGGT GAGGGGACCC CACCTGCACC ACCCCGTCCT ACCTCCTGGA GGAGGCCTTG 003440
003441 CCCCTGACAG GCAGCCTCCA GCCCTCCCAC CCTGATCCCT GTGTGGGATG GCCAGAGCAT GCCCAGCATG CTGGGGTTCG 003520
003521 GCGGTGGGGG GCATCTGGAG GGAGGGACAT GTCAGTTCGG GGAGGGATGA GCAGCCTAAG TGACTGCAGT GCTGGGCCAT 003600
003601 CTCCTGCATG GTGGAGCTCC CCTCGAGCCG CCTGTCTGCA GGGGGCTCTG GCCAGTAGTG CAGCCGGGCA GGGTCTGTAC 003680
003681 GGCACAGGCT GCACCAGCCT CCATGCAGAC CAGTCTGTGT GGGAGTGGGG GTCTCAGAGG GCCCAGCCGG CCTATGCCAT 003760
003761 GAGCATGGTG CTGGCCCAGA GGGGGAGCTG AACAGCAGCT GGGTCGGTGC GTTACCTGGT GGGGCAGCAG ACAGCAGCTG 003840
003841 CCCTGGCTGG GGTTCAAGCC CCGGGCTGGC CTGGTGGAAT CCCCTCTCCG TCACCCCCAG GTTCTGTTCT TGCAGGTGTC 003920
003921 AGGCCTGGGG CCTTGAGACA GACCTGCAGT CTCCACCACA GCCACAGTGG GTGGGGTCTG GGTCCTCACG GAGGTGATCC 004000
004001 TCCACCCCCA CACCTACCTT GTGCATGGCA GTGGTGTCTC CTGGAGCTGG TGAGACCCCA CCTCACTCAG GAAACCCCCC 004080
004081 AGACGCCCCC AGGCAGAAGT GGCCATACTC CAGGGCCTGC ATCCCTGTGC CCCACAGTGC GCCCTGGCCG GTTGGTTGTA 004160
004161 GGAACTCAGA AAAGCAAAGC AAACAGGATG GTTCCCTGCT GGACACATTA CATTCCCTGC TGGACACATT TCTATTGCAG 004240
004241 ATCTTTAGTC CAGGATTCCA GGGTAGCCAA GGTCACCTGA GTCCTGGGGA CTCTGGGCCT GGTCTCTGAA AGCAGCCAGT 004320
004321 AAGACAGAGA TGGGAAACCC AGCAAGATGG AGTGAGCCAA GGGCACAGTT GGGTCCAGGC GCAGCAGGGA GCTGCCTGGG 004400
004401 GGTGACACAC ACTTGACGGA GGCCACTGCA CACACCCTAC CCCGGCCTGA ACTTGAGCAC ttcctttttt tttttttttt 004480
004481 tagatggagt ctcactgtag tccagatgga gtgcaatggc gtgatctcgg ctcactgcaa gctccgcctc cccggttcac 004560
004561 gccattctct tgcctcagcc tcctgagtag ctgggactac aggtgcccgc caccacaccc ggctaatttt tttgtatttt 004640
004641 tagtagagac ggggtttcac cgtgttagcc aggatggtct tgatttttcg acttcatgat ccgcctgcct cggcctccca 004720
004721 aagtgctggg attacaggcg tgagccacca tgcccggccA AGCACTTCCT TGAACACAGA GGTgaccatg aggagggagg 004800
004801 cgtgaaccag gatgacgggg cagcagatgg agcctgcctc cctgagacct caggtgaccg agtgctggac tgcctcctcc 004880
004881 tgcctacatg gctgagaaat aaacttcttt ttcaaaccac tgtgacctgg ggttttctga taccctcagc aagcctgttc 004960
004961 ctGTGGCCTG GTGTGGGTCC CCTGACCTGT GGCCTGGGCT GCCTGTATCC GGCCTGCCCC TCTGCTCCGC TGTAAACCTG 005040
005041 TGATGGCAGT GGAGGGGCTT GGCCTGGGCC CGCCCCACCG CGAGGTCTTC CCCTCTCCGA GTTCTGGGTG TGGTTTCAGT 005120
005121 TGAGCCACGC CGTTGGACTG GGCCGGCCTG GAGGACAGAA GGCACAGGCT CTTCCACATA CCTGGCTCGT GGCCCATGGG 005200
005201 CCGTCTGCTC ACGGGAGCCC TGCACCAGGC CATGCAGAGC AGTGAAGTCA AAACCTCGTT TCCCAGGTCT AAGGTGAACT 005280
005281 GGGAGCAGGG CAGGAGTTGG CTCTGTCAGA TGCCACAGTT GTTTGGGGAC AGTGTCCGTA GAGAATGTGT GGCCCCCCTC 005360
005361 CGTGGTCTAG GGTGGAGCGT GGATAGGCCG GTCACTCCTA TCCCTGGGCC CAAGGCTCTT TTCCCCTGCC CTCCCGTGGG 005440
005441 CTGGGAACTG CCACAGCTCA GACAAAAATC GGCCAGGGCA GGGTCCTGAG GCTTCAGTCC CAGGCTCCTT AGGGCACCCC 005520
005521 TGGTGACCCA GCTCCAGCAC TGAGTTTCCA GAGGCCTTGA GGATTTCCCT GGGATGCCAG ATGGGCCCTT CCTGCTGCTC 005600
005601 CTGGGGTCAT CTAAGCTCCA GGCTTGGGTG CAGCCCTGGG CCCCTGCCAC AGACGCCCTG AATGCACCTG CCCCTCCCGG 005680
005681 TCCCCACGCA GCAGCCTCCT GAGCTGCGGA TCATTTTCCT AAGAAGGCAT TCTACTTGTG CCAGTCCTTA CTTAAAGACC 005760
005761 CCTGCTGGTG CTGGCAGCGT GCTACCGGGA AGGATGGTAT CTCCTGTGCG TGTCCTGTGT ACGCTGGCCT CACACGTGTG 005840
005841 TGCCTCATGC GGGCTGTGCC CTCAGTCCTA TACGCTCTCC CCAACCCTCT TTTAGGGTGT CACAGGAGAA AAATGACACA 005920
005921 TTCCTAAATC TCTAACACAT GGGCTTGAAA ACAAGTCTGA GGATGCCCTG CAGAAGGGCC ATGGGCATGG ACATGGAGCT 006000
006001 GGGTGGCCTC GTGCACTGAC CTTTCCCTCT TCCTAGCCCC AGGCCCGACC TAGAGGCCAC AGCCCCTGCG GACAGGCTGT 006080
006081 GGGGCCAG
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Predicted Small Protein

Name NONHSAT052091_smProtein_5195:5488
Length 98
Molecular weight 10754.3849
Aromaticity 0.0721649484536
Instability index 64.8804123711
Isoelectric point 10.412902832
Runs 13
Runs residual 0.00248186330661
Runs probability 0.0392632451456
Amino acid sequence MGRLLTGALHQAMQSSEVKTSFPRSKVNWEQGRSWLCQMPQLFGDSVRRECVAPLRGLGW
SVDRPVTPIPGPKALFPCPPVGWELPQLRQKSARAGS
Secondary structure LLLHHHHHHHHHHHLLLLLLLLLLLLLLHHHLLEELLLLLLLLLLLLEEEEEELLLLLLL
EELLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHLLLL
PRMN -
PiMo -