NONHSAT052207
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT052207 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
721 nt |
Genomic location |
chr17-:21476538..21477769 |
Exon number |
2 |
Exons |
21476538..21476992,21477504..21477769 |
Genome context |
|
Sequence |
000001 cgaggagcga gccgcttctc cccatcacag cgattcccag ggttgtcata gaaaccactc cctggggctt ggcaaagcag 000080
000081 gagccctccg tggcagggct tcggtgtcgg ggctccgagg ctccggcctg acttctccac ggggtccaca ggagcgtctc 000160 000161 cggatgccag gacctgaaat gggccgacca ggatgaggaa accacaggca gaggccgggg aagcagcgcg gcatcccatc 000240 000241 ctcaggcctg cccggacggt gttcggAGGA CCACACTCCA GCCCAGGACA AAAGCCCCAC GGTAGCACAT TGTCCGGCAG 000320 000321 GAGAGGAGCA GACCCACGTC CAAGAAGATG GTTGTACCTT TCCACGCCTC TTCTCTGCGA AATGAAGCCA CACCATGACA 000400 000401 CAATCTTGAA GAGGAAGCCG GGAATGGGAG ACGGCAACAA TCCCTGTCCC TGGAACGCTG GCCTCTATGG ACAAGCCACC 000480 000481 CGCTTCGCAC CCCTCCCCTT ATGCCCGTGG CGGTGGCACG GCGCCGTATC CTGCCTGGGC TCTGGCCTCT GCTCTGTCCT 000560 000561 CCCTCTTCCA CTGTCTCCCC TGTTTCTCAG CGGCCTAGAT GCCTCTTGGT CTGGCTGAAT ATCTTCTATG AAGATCACTT 000640 000641 CCCCGTCCAT CAGGGAGACA ATTCCTGGAG ATTCGTGTCA TGACTGTTTC TCTCTCCAAA CCTGTTTCTG CTGGATTGCG 000720 000721 C |
Predicted Small Protein
Name | NONHSAT052207_smProtein_500:682 |
Length | 61 |
Molecular weight | 6943.0497 |
Aromaticity | 0.116666666667 |
Instability index | 103.031833333 |
Isoelectric point | 9.67669677734 |
Runs | 8 |
Runs residual | 0.0164007092199 |
Runs probability | 0.025956103162 |
Amino acid sequence | MPVAVARRRILPGLWPLLCPPSSTVSPVSQRPRCLLVWLNIFYEDHFPVHQGDNSWRFVS |
Secondary structure | LLEEEEHHHLLLLLLLLLLLLLLLLLLLLLLLEEEEEEEEEEELLLLLLLLLLLLEEEEL |
PRMN | - |
PiMo | - |