NONHSAT052219
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT052219 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
538 nt |
Genomic location |
chr17-:21560548..21562330 |
Exon number |
2 |
Exons |
21560548..21560623,21561869..21562330 |
Genome context |
|
Sequence |
000001 GCTTAGAAAT GGTGAGAGAA CTTTGGATGT GGAATGTGGA GTAGGAGGAA CACGAAGTGG GGATCTGCAC TTGGGGTGGT 000080
000081 CAGCACTGCG GATGCCCAGC AAAGGCACTG CCTGGTCCAC ATCCCGGAGT GGTCTCTGCG CCCGAGTCGG CATCGCAGCT 000160 000161 GATGGTGAAA CTTTTGGTGT GGCAGAAGAG TGTCCACAAA CTTTGGAAGG TATCCGCTGC CTCCTCCATA GCCGTGTATC 000240 000241 CCTGCCGAGG GCGATCATCT CGGGGAGCCG AAAGTCCGGC TCATGGGCCA GGGCTGGCTG GCTGGAGCCA CTTGCGCGGC 000320 000321 GCAGCCCTGG CGGAGGTTCA GGCGGCCCCG GTGTCGCAAG CGGCTGTGAG TGATGCCTCC TTGGTGCCGG AGGGGTCCCA 000400 000401 GGAAGTCTGA AGACCAGGGC TGACCAGCGG GCAGCATGGT GGCCGCGATA GAAGGTGACA GGTGATGAAT GGTGTTGTAT 000480 000481 TTTGAATAAA ATATCTAAGC ATCCTTTTGT GAGCAAGGAG CATGATGGTT GGTACTTA |
Predicted Small Protein
Name | NONHSAT052219_smProtein_161:409 |
Length | 83 |
Molecular weight | 8488.5913 |
Aromaticity | 0.0487804878049 |
Instability index | 46.912195122 |
Isoelectric point | 9.51190185547 |
Runs | 10 |
Runs residual | 0.0139504804139 |
Runs probability | 0.0377495142201 |
Amino acid sequence | MVKLLVWQKSVHKLWKVSAASSIAVYPCRGRSSRGAESPAHGPGLAGWSHLRGAALAEVQ AAPVSQAAVSDASLVPEGSQEV |
Secondary structure | LEEEEEEEHHHHHHHHHHHHLLEEEELLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHH HLLLLHHHHLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |