NONHSAT052310

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT052310

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2513 nt

Genomic location

chr17+:25744716..25757216

Exon number

7

Exons

25744716..25746289,25746567..25746639,25746796..25746879,25748017..25748167,25749583..25749692,25752985..25753050,25756762..25757216

Genome context

Sequence
000001 CTGTGATGCT GGCTCTGAGC CCAGGGGGTG ACAGTGACAA GGAACTGGGT GCACACATGG GTGAGGCAGC CAGGCCTGGC 000080
000081 CAGAGAAGCA ACAGACATGT GCACAGATGT GTTTACCTAC ATACATGTGT GCACACACAT GTGCAAACAC ATGGCACGCA 000160
000161 AGCATGATGA TGCCTTAGGC AATGCAGGAT GCTGACTTTG GGCCCTGCTG ACCCAGGCAA GGCGCCTTTG TGATGCTTGC 000240
000241 CTTTATCTCA GAATGTCACT GGTGCTTAGC ACCCGTCCGC TCTCTGCCCT GCCTCTGTGT TCTACAGCAG CTACACACAG 000320
000321 ACAGTGGTAT CTGTGAGCAG CTCTGTGGAC TCAAAGGTTT TCTCCCTGAG AGGCGTAACC CAGGCCAGCT GATTCATCAG 000400
000401 AATCAGGTGA GTGTGACCTG CTCTCTTCCC TCCATGCTGA CTTGGGGACA GTGGCTAATG GTGTGGGTGG TGCTGGCCTC 000480
000481 TGGGCACGTG CTGAGGAGGG TCATCCCTGA ACACTCACCG GGTGCCCGTT CTACGCTGCC CGTGTGGACA GTTGTCTCTT 000560
000561 TCATCCTCAT GGTGGCTCCC GCATGTACCC ATTTGACAGG TGAGATGTCT GGGGTCAGAG AGGCGGTAAC TGGCCTGGGA 000640
000641 ATCCCAACAG GACCCTGGGT TTTGCTCTTG GCCCTGCCCT GTGCCATGTT GGACTTCAGG CCTGAACCCT GCGGCCTCCT 000720
000721 TGCCCCAGAT CCCAAATCTG TCCAGGGTTT CTGATCCCCA CTGGGATGGG GCAGAGCCTC GCCATGGCAG AGCCACTGAG 000800
000801 ATGGATCCAT TGTGGGTGAG GTGGAGGGGA GGGTCCTCAG AACACATCTG TGCCCTAAGC TGGGTCTTGA TGGTCCCTGT 000880
000881 GGGACCCACT GAACACACAT GGTCCTTTGT CCGAGAGTGG GATGGGGAGC CTTCTGCCTT TGGGCAGTCG TGGAAAATGA 000960
000961 AGGATCCCTG GTGAGCTGGC TGGAGGGAGA CTGTCTTCCC TCCTGTTAAA AGGGGTCCAG GTACTGGGGT TCTCCGCAAG 001040
001041 TATTTCTTTC TCTGTCTGAT CCTCTCGAGG CCTCACCCTC CTTTTGCCCT GAGTGTTCCC AGGAGGGATG GTCCATCTAG 001120
001121 GTGTTCTCCA GAACCAAGGA CCCACTGTTC TTCCTCAGTG ACCCAGGAAA ATGAAGCCCC CTCCTGTATG GATAGCTCAG 001200
001201 AATGGTGGAG TCCACCGTCC CTCCCCGAGA GATGTGGTTT CCACGAGCAT AGGGGCTGCT TTGGAGACAG TAGATTATTT 001280
001281 TCATCCCCCA AACCAAACAC CCTCCTGCTT AACTGGCGTT GTTCCTAAAG TGGCTTCACT GGTGAGACTG AAGGGCCACA 001360
001361 GTAGCCCAAG TGATGAGTGG AGTAGAACCG AGCAGTCAGG AGAGGTCTTG TTCCCGTAGG AAACTGGGCA TCTCTGTGGT 001440
001441 CCCTGAGCAT CCCAGGAGGC CGACTGTACA GAGACCTCTG GTCCCTGACC CCAGTCTGCC TCCACATCCC TGGAATAGCC 001520
001521 CATCATGGGC CCTTCAACCT TGGCAGGTGG ACACCATTCA ACATGCTGGG GCAGGATGGA CATGGTAGAG GATGTGGATA 001600
001601 CTTTGCAGGA GTGAGAGGAC ATCATTATGA AGTATGAGAA CGTACAGGGA CACCGAGCTG GGCTGCCAGC AGACACGGGG 001680
001681 CCTAAAGCCT GTTGGAATCT ACAGCAGCAC TGATCGCTTT GGGATTCTGC AGCTGAGCCC TGAGCTGGAT GGGACAGAGC 001760
001761 CAGTCCTTTC TGGGGGTCGG CTCCCAGACC GAGATGGCTC CAAACCTTGT GCAAGTCCTC AGCTCTGCCT GGGCTGCATT 001840
001841 ACAGTGAGAA GGAACTGCCC GGTCAGAGCC CGGGAGGTGA AGGTCATGAA GGAGAAGGGC AAGAGATCCT CTGAACACAT 001920
001921 CCACCAGGTC TACCTGGACA TGAGCTGGAC ACTAGGGAAC CACATCTTCT TCAGGGATCG ATATGGAGTC AAGACAAGGA 002000
002001 AGGTCAATGC ACACAGGGTT CCTCATTCAG CTGGCTTCTC TGGGTGCTGA ATGATGGGCA AAACCCGAGA AAGGGTCCTC 002080
002081 AGGACCCAGG TCTGTGCTGG CATCACATGG CGGGAAGACC CTCTGCAAGG GGGACAGGAA GGCCCTTCCC GGCCCACCAG 002160
002161 CCCGGTTCCA GCGGCCCATT TGGTCCGCTT CTCCACCTCG TCCTACACCC TGTCCTGGTG GGGCTGTCCA TGAGGCCAAG 002240
002241 GCCCAGGAAC ATGTGGGGGC TTCTGGGGAG CCCAGGGCAG CAGACCACTC TCTGGGGGCA CCTGGGACTC AGGGCATGCC 002320
002321 CAGCCTGGCC CCGGCTCAGG GAGGACCTCG GCGTTCCTGG AGATTCCTGC AGTGGAACTC TATGCTCCAG CTCCCGACGG 002400
002401 ACCTGGATGT GGGGGGCCCT TGGTTCCCCC ATGACGATTT CAAACAGAGC TGCTGGGTCC ATGTCCCTTC TAAATGTGTC 002480
002481 CTGGACAGCC CCGGGACCAT GGGACAGGCC TAG
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Predicted Small Protein

Name NONHSAT052310_smProtein_2315:2512
Length 66
Molecular weight 7266.2203
Aromaticity 0.107692307692
Instability index 87.2707692308
Isoelectric point 6.68914794922
Runs 7
Runs residual 0.0425961538462
Runs probability 0.0469250763368
Amino acid sequence MPSLAPAQGGPRRSWRFLQWNSMLQLPTDLDVGGPWFPHDDFKQSCWVHVPSKCVLDSPG
TMGQA
Secondary structure LLLLLLLLLLLLLLHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLEEEEEELLEEEELLLL
LLLLL
PRMN -
PiMo -