NONHSAT052336

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT052336

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1423 nt

Genomic location

chr17-:25985480..25991673

Exon number

4

Exons

25985480..25985893,25988861..25988939,25989037..25989922,25991630..25991673

Genome context

Sequence
000001 AAGAAATCCC TCTTCATGCT GAAAGAGCTC ACCAACAAAT TCAGGCAGCC TGTGAAACGT TTGATGTCCG AAGCCAACAG 000080
000081 CACATTCAGA TCCCCAAGCT CTACACCTCC AATGTGACCT GGGGCTTGCA CCACTTCAGG CTCGTGCAGG ACTCACAGCC 000160
000161 TTTGGACCTC AGCTAAGGGA CCTGCTTCTC TGTAGCACAT GGGGCTTGTT TGTGTTGGGG TCTGAGCCCT GAGCTCATGG 000240
000241 TCAAGGAGAA CCCCAGGTCC TTCTGAACAG AGACAGCTGG CCTCGGGGCC TCCCTCTCAC TGCATGCAAG AGCCTGTTAG 000320
000321 GGCACAAGAC TCAAGGCGCT GAGGGAGGCT GTTTCAGGAG GGAGCCGCAG AAGGATGGTG GAGAGAGAAG GGGACAGcat 000400
000401 ccgccgaggg cctactgtgt gccaggcact gtccagggct cctggcccac atgggctaag tgaatctgga cactcctcct 000480
000481 gggagaaagg cacagatgga gaaattgcag ttcagggagg tgaagcaagc tgcTAGCCTG TGGCCACTTT GGGATCTGAG 000560
000561 CGCCAGCCTT CTAGCCACAA AGGCAGCAAA GGGTCATGAA GAAGGCATCA CAGAGGCGAT TCCAGGCTGT AGTGGTGAAC 000640
000641 TCTCCACTCT GCACCCCCAG GTGCTGTGCC CTGTGCCCTG ATTAGATAGT CCTGAAGGTT TCTACATGTT TAAGATATCC 000720
000721 CCAATGTCAA CGATGCTCTC CTGTGGATCC CAAGCTGTGG AGATGTCCTG GGACTTTCCA TTTTAGGTTC CTAAATTGAA 000800
000801 TTTCCCAACA CCTAGAAGCA ACCCAGCTGC CCTGTATCAG ACCAAGGACC TTTATTTGTG ATTCAGAAAC AGTGGAATAA 000880
000881 AAGGAAAGGA AAGAAAACCC CAACAGCCAC CTCAGGAGGA TGCCCCAAGG CCCTCAGCAG CATGCACGCC AATAACATGT 000960
000961 TCACCACGAG GCTCAAATCT CAGCAGAAGC TACAGAGTCC AACATCCAGG CAGCTACTGG GTCAGTGACA AGAGGCTGCC 001040
001041 CCCCTGCTCA CTCAGCCAGG CCCTCACCTA CTTCCTGGAC ATCACCACAC CCCCACCCAG CTGCTGCTCC AAAAGCTGGC 001120
001121 CCAGGTGGCC ACAGAAAAGC CTGAGAGACG AGGCTGGAGG CCCTGTGCCA GGTGAAGATC AGGGCTGGTG GGCAGTGGGG 001200
001201 GTATGTGGGG GGTCCCAGCA TGTGGGGAGC CAGAGTCCAG AGCTGGTTTT AACTTTCAAG AGGGATCCAC ACCAGGTTCC 001280
001281 CAAAGTGAGA CTTGTCAAAG GCTGGTGGGA AGCCAGGCAT CGTCCGCTGG CCCATGTCTA GGACACAGTT GTGTTGAGTG 001360
001361 AACTGAATTT TTCCAAGTGT CTGCAGGATG CAACCAGAGT GCACTGCCTT GAACATTAGC TAG
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Predicted Small Protein

Name NONHSAT052336_smProtein_374:535
Length 54
Molecular weight 5480.9091
Aromaticity 0.0188679245283
Instability index 43.5056603774
Isoelectric point 5.11456298828
Runs 9
Runs residual 0.00954901058444
Runs probability 0.0389899703625
Amino acid sequence MVEREGDSIRRGPTVCQALSRAPGPHGLSESGHSSWEKGTDGEIAVQGGEASC
Secondary structure LEELLLLLLLLLLHHHHHHHLLLLLLLLLLLLLLLLLLLLLLEEEEELLEEEL
PRMN -
PiMo -