NONHSAT052576
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT052576 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
596 nt |
Genomic location |
chr17-:26731258..26732765 |
Exon number |
2 |
Exons |
26731258..26731786,26732699..26732765 |
Genome context |
|
Sequence |
000001 AAAGGGGCCT GACCGAGAAC CTCAGCGGGT GGGATGCGAA AAGCTGAGCT AAAGTCTGGC CTTGCAGCTC AGCATCTCCC 000080
000081 CTACCTCACC AGCCTGCTGG CCCTGAAGCT CCTGCAGTAC TGCCTGGCCG ATGCCTGGGT AGCTGAGATC GGCCTGGCCT 000160 000161 TCAACATCCT GGGGATGGTG GTCTTTGCCT TTGCCACTAT CACGCCTCTC ATGTTCACAG GTAAAGTGTG TGGGCTCAGG 000240 000241 GACAGCTTGT CCCAGAGGCA CTGGGTAAGA ACTGGGGGCC GGCCACTCAC TGCCCCCAGA TGTGGTTCAT TCCTGTGTCT 000320 000321 TTGGAAACAT AGTTATGCCC CCAGCCTGCA CTGGAGAACA GACAACTAAG AAATCCCTCA AAAATGCCAT CTTTGATACA 000400 000401 TGGAAAATAT AGACCTTCAG TAGCTAAAGT AATTAACCCA CTGTTATCAA CCATTAATAT TGTTAGTAAT ATAGAGCAAA 000480 000481 AGACAAAAGT GTGGCTCATA CACTAATTGC TTTACCCCTT GGCCTCCCAC CGCCTATTCA TATGTTCTTA AACAAAGTCC 000560 000561 ATGCCATTAA TGCCTGGTAC TCACTTCTCT GATAAG |
Predicted Small Protein
Name | NONHSAT052576_smProtein_383:505 |
Length | 41 |
Molecular weight | 4539.3907 |
Aromaticity | 0.05 |
Instability index | 66.175 |
Isoelectric point | 10.171081543 |
Runs | 7 |
Runs residual | 0.00302419354839 |
Runs probability | 0.0314558255735 |
Amino acid sequence | MPSLIHGKYRPSVAKVINPLLSTINIVSNIEQKTKVWLIH |
Secondary structure | LLLLLLLLLLHHHHHHHHHHHHHHEEEHHHHLLLEEEEEL |
PRMN | - |
PiMo | - |