NONHSAT052588

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT052588

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1023 nt

Genomic location

chr17-:26904621..26906270

Exon number

3

Exons

26904621..26904788,26905028..26905770,26906159..26906270

Genome context

Sequence
000001 TTGTGAGCTG CAAGCTAGGC TGCAGGCCCA GGAAGAACAG CATCAGGAAG TCCAGAAGGC AAAAGAAGCA GACATAGAGA 000080
000081 AGCTGAACCA GGCCTTGTGC TTGCGCTACA AGAATGAAAA GGAGCTCCAG GAAGTGATAC AGCAGCAGAA TGAGAAGATC 000160
000161 CTAGAACAGA TAGACAAGAG TGGCGAGCTC ATAGTATGTT CACCATCATG CCCAGGCCTT TGCCTTCTGT GTTACTGGTC 000240
000241 AGCCAGGATC CCAAGTATGA GAAATGGTTT GCTTTTGTTC ACCACATGTT GTCTATCCTT ATGTCCTATT GGACACCTCT 000320
000321 CCATTCTCAT TCCCAGAGCC TTAGAGAGGA GGTGACCCAC CTTACCCGCT CACTTCGGCG TGCGGAGACA GAGACCAAAG 000400
000401 TGCTCCAGGA GGCCCTGGCA GGCCAGCTGG ACTCCAACTG CCAGCCTATG GCCACCAATT GGATCCAGGA GAAAGTGTGG 000480
000481 CTCTCTCAGG AGGTGACTCA GAGTTAACAG AGGAGCTGGA CAGCAGGTGG GGACCCCAGG CTGTACCCCT GTTGATCTGG 000560
000561 ACATATTTCT AGGTGGACAA ACTGAGAGTG ATGTTCCTGG AGATGAAAAA TGAGAAGGAA AAACTCATGA TCAAGTTCCA 000640
000641 GAGCCATGTA AGAATGTCCA TGCCATTCCA GGGCCATTTC CTACCATCGT TAACAAATGC CCCGCCATGT TTCCCCTGTC 000720
000721 CTACCAAGTT TGCTCTTTTA TGCATAGGAC TTATAAAATC TGTTTGCTTT CTAGAGAAAT ATCCTAGAGG AGAACCTTCG 000800
000801 GCGCTCTGAC AAGGAGTTAG AAAAACTAGA TGACATTGTT CAGCATATTT ATAAGACCCT GCTCTCTATT CCAGAGGTGG 000880
000881 TGAGGGGATG CAAAGAACTA CAGGGATTGC TGGAATTTCT GAGCTAAGAA ACTGAAAGCC AGAATCTGCT TCACCTCTTT 000960
000961 TTACCTGCAA TACCCCCTTA CCCCAATACC AAGACCAACT GGCATAGAGC CAACTGAGAT AAA
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Predicted Small Protein

Name NONHSAT052588_smProtein_590:808
Length 73
Molecular weight 8248.9031
Aromaticity 0.111111111111
Instability index 41.525
Isoelectric point 9.07147216797
Runs 8
Runs residual 0.0298053527981
Runs probability 0.0375485779897
Amino acid sequence MFLEMKNEKEKLMIKFQSHVRMSMPFQGHFLPSLTNAPPCFPCPTKFALLCIGLIKSVCF
LEKYPRGEPSAL
Secondary structure LLLLLLHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHEE
LEELLLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHL
LLLLLLLLLLLL
PiMo oooooooooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTi
iiiiiiiiiiii