NONHSAT052823

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT052823

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

985 nt

Genomic location

chr17+:29058662..29096109

Exon number

6

Exons

29058662..29059141,29061915..29061961,29062051..29062115,29086509..29086557,29093521..29093606,29095852..29096109

Genome context

Sequence
000001 GGCGGAGCGA GGCCTGGGTA GGGTGAGCGG CCTCCGAAGC GGAGCGGGGC TCTGAGGAGA CACTTTTTct tcctccctcc 000080
000081 ttccctcctc tcctcctgcc ttcccttccc ctttcctccc ctctctccTC CTTCTCCCCT CGGTCAGCCG GAGCCTGCTG 000160
000161 GGGCGAGCGG TTGGTATTGC AGGCGCTTAC TCTCCGGGGC CGCCCGGCGA GTAGCTGGCC GGGGAAGGAG GCAGGAACCG 000240
000241 CGATGGCGCC TCAGAAGCAC GGCGGTGGGG GAGGGGGCGG CTCGGGGCCC AGCGCGGGGT Ccgggggagg cggcttcggg 000320
000321 ggttcggcgg cgacggcttc gagcggcaaa tccggcggcg ggggctgtgg aggcggtggc agTTACTCGG CCTCCTCCTC 000400
000401 CTCCGCGGCG TTACCGGTGA AGAAGTCGAA AATGGAGCAC GTCCAGGCTG ACCACGAGCT TTTCCTCCAG GCCTTTGAGA 000480
000481 AGCCAACACA GATCTATAGA TTTCTTTGAA CTCGGAATCT CATAGCACCA ATATTTTTGC ACAGAACTCT TACTTACATG 000560
000561 TCTCATCGAA ACTCCAGAAC AAACATCAAA AGCTTGTCAG CTCATTTGCA GCTTACATTT TTGGTTTCTT CCACAAAAAT 000640
000641 GATAAGCCAT CACCAAACTC AGAAAATGAA CAAAATTCTG TTACCCTGGA AGTCCTGCTT GTGAAAGTTT GCCACAAAAA 000720
000721 AAGAAAGGAT GTATGTTGTC CAATAAGGCA AGTTCCCACA GGTAAAAAGC AGGTGCCTTT GAATCCTGAC CTCAATCAAA 000800
000801 CAAAACCTGG AAATTTCCCG TCCCTTGCAG TTTCCAGTAA TGAATTTGAA CCTAGTAACA GCCACATGGT GAAGTCTTAC 000880
000881 TCGTTGCTAT TTAGAGTGAC TCGTCCAAGA AGAAGAGAGT TTAATGGAAT GATTAATGGA GAAACCATGA AAATATTGGT 000960
000961 AATTTTTTTT TTTACTAGAT TTTAT
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Predicted Small Protein

Name NONHSAT052823_smProtein_242:508
Length 89
Molecular weight 8303.9864
Aromaticity 0.0681818181818
Instability index 52.9045454545
Isoelectric point 9.30242919922
Runs 14
Runs residual 0.0277272727273
Runs probability 0.0368057132763
Amino acid sequence MAPQKHGGGGGGGSGPSAGSGGGGFGGSAATASSGKSGGGGCGGGGSYSASSSSAALPVK
KSKMEHVQADHELFLQAFEKPTQIYRFL
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLLLHHHEEEELLLLLLLLLLLLLEEEELLLLEEELLL
LLLLEEEELLHHHHHHHHLLLLLEEEEL
PRMN -
PiMo -