NONHSAT053004
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT053004 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
508 nt |
Genomic location |
chr17-:32484200..32501983 |
Exon number |
2 |
Exons |
32484200..32484302,32501579..32501983 |
Genome context |
|
Sequence |
000001 cattcatgcc ctactcctag catgtgtttg gtgcacagcg agcactatag taactattga tgttgttaAC ACATTATTTC 000080
000081 CTTCCTATTA TCCTTAAGAG GGAGTTCTTA CCTTCTCATC CCATCTCTTT AGTTTTCTTA ATATAACTCT AAATTAAAAT 000160 000161 AAAACTCTTC ACTTTGTTAG GAAGAGGACC ATGACTTGCT TAGGCCCGAC TAACATTTGC ACTCACCATT TTGTTACACA 000240 000241 GATGGCAAAC CAGGAAAACA GAGCTCAGTA CAGAAGGGAG TTGGGCAGCC TCTGTTCCTG TTTGGCTCTG TCCTTGAAGA 000320 000321 Aagtgataag aagtgcacag attttggaat taaacagacc atggtttgaa gtctggatct tccagttgta accaggtggc 000400 000401 attggGAGGC GAGGAGAGAA TGGATCCCGG TCTGAGCTCC CCGCTTCCGT CCCCAGTCTC CAGATACCGG TCCTCGCCTC 000480 000481 TCCGCGCCGC GCGCTGCCTC CTCTCCCC |
Predicted Small Protein
Name | NONHSAT053004_smProtein_59:145 |
Length | 29 |
Molecular weight | 3352.1252 |
Aromaticity | 0.142857142857 |
Instability index | 60.4321428571 |
Isoelectric point | 8.38470458984 |
Runs | 5 |
Runs residual | 0.0246478873239 |
Runs probability | 0.0390037095919 |
Amino acid sequence | MLLTHYFLPIILKREFLPSHPISLVFLI |
Secondary structure | LLHHHHHHHHHHHHHHLLLLLLLLLEEL |
PRMN | - |
PiMo | - |