NONHSAT053180

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT053180

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3239 nt

Genomic location

chr17+:34439685..34454720

Exon number

4

Exons

34439685..34442216,34443949..34444020,34452978..34453058,34454167..34454720

Genome context

Sequence
000001 TAGAAAAACA GACACAAGCT TTTATCATGC AAGTGGCTGA CCTGCAACAA AAGGGGCATG CACAGCCTCA CCAGGTGTCT 000080
000081 ATTGTTAAAG TGGGGGCATT GATTGGAAAA GAATAGGACC CTGCAACTTG GAATGGGGAA ATGTGGGAGC ACCCAGATGA 000160
000161 AGCTGGGGAC ACTGAGTTTG TAAACTCTGA TGAACCTTTT TTGCCAGAAG GAACAGCTTC CCAATCCCCA GTAGTGGCAA 000240
000241 CATCCGCTCC CTGACCCATG CTGCCATCAG CCTTTCCACC TTTGTCCACA GATAAACCCT GTGCTGCCTG AGGCAACAGT 000320
000321 GATGGCCTCC CCTGAGGCAG TTGCCAGGCA AAGTAATGTT GATTCCCCTC AGGAGCCACA CCCAACACCC CTGTTTGCTG 000400
000401 GCCCACTACA TTGATGACAG TCTAGACATG TAACTACACT AAATTCTGGT CCATTACACT GATGACAGTC TAGACCTGTA 000480
000481 ACTAAAGTCC CAGTGGGCCC CTGGAAGTGA GATTGAGAGT GTGACCCATG AGGAGGTGCA TGGCACTTCA AAAGAACTGT 000560
000561 TTGAGTTCTC TAATTTATAA AAACAGCAAT CTGGAGAACA GGCATGGGAA TGGATGTTAA GGGTATGGGG TAATGGTGGA 000640
000641 AGGAACATAG AGTTGGATCA GGCTGAATTT ATTGATTTGG GCCCACTAAG TAGGGATTCT GCATTTAATG TTGCAGATTG 000720
000721 GGGAGTTACA AAAGATTCTA ATAGTTTATT TGCTTGGTTA GCTGAAATAT GGAATAAAAG ATGGCCCACT GTGAGCCAGC 000800
000801 TGGAAATGCC TGATCTCTCC TGGTTTAATG TAGAGGAAGG GATCCAAAGG CTTAGGGAGA TTGGGATGGT GGAGTGGATT 000880
000881 AGTCACTTTA GACCTAATCA TCCCAGTGGG AAGGGTCCAG AAATTAACAT GTCTCCTGGT GCCTGGTATG CACCAATTGA 000960
000961 CTTGGCAAAT GCTTTTTCTC CATTCCTGTC CATAAGGCCC ACCAGAAGCA ATTTGCTTTC AACTGGCAAG GCCAGCAATA 001040
001041 TACCTTTACT GTCCTACCTC AGGGGTATAT CAACTCTCCG GTTTTGTGTC ATAATCTTAT TCAGAGAGAC CTTGAACACT 001120
001121 TTTTGCTTCT GCAAGATATC ACACTGGTCC ATTACAATGA TGACATTATG ATGACTAGAT CCAGTGAACA AGAAGTAGCA 001200
001201 AACACACTGG ACTTATTGGT GAGACATTTG CATGCCAGAG GATGGGAAAT AAATCTGACT AAAATTCAGG GAACTTCTAC 001280
001281 CTCAGTAAAA TTTCTAGGGG TCCAGTGGTG TGGGGCCTGT CGAGATATTC CTTCTAAGGT AAAGGATAAG TTGCTGCATT 001360
001361 TGGCCCCTCC TACAACCGAG AAAGAGGCAC AAAGCCTAGT GGGCCTGTTT GGATTTTGGA GGCAACACAT TTGGGAGTGT 001440
001441 TACTCTGGCC CATTTATTGA GTGACCCGAA AGGCTGCCAG TTCTGAGTGG GATCCAGAAC AGGAGAAGGC TCTGCAATAG 001520
001521 GTCCAGGCTG CTGTGCAAGC TGCTCTGCCA CTTGGACCAT ATGACACAGC AAATCCAATG GTGCTTGAGG TGTCAGTGGT 001600
001601 AGATAAGGAT GCTGTTTGGA GCCTTTGGCA GGTTCCCATA GGTGAATCAC AGCAGAGGCC TCCAGGATTT TGGAGCAAGT 001680
001681 CCCTGCCATC TTGTTCAGAT AACTACTCTC CTTTTGAGAG ACAGCTCTTG GCCTGTTACT GGGCTTTGGT GGAAACTGAA 001760
001761 CGTTTGACTA TGGGTCATCA AGTCACCATG TGACCTGAAC TACCTGTCAT GAACTGGGTG TTTTCCAACC CATCTAGCCA 001840
001841 CAAAGTGGGT CATGCACAGC AGCATTCCAT CATCAAATGG AAGTGGTATA TATGTGATCA GGCTTGAGCA GGTCCTGAAG 001920
001921 GCCAAGTAAG TTACATGAGG ACATGGCTCA AATGCCCATG GTCTCCACTC CTGCCACCCT GCCTTCTCTC CCCCAGCCTG 002000
002001 CACCGATGGG CCTATGATCA GTTGACAGAG TAAAAGAAGA CTAGGGCCAG GTTCACAGAT GGTTCCACAC GATATGCAGG 002080
002081 CGCCACCAGA AAGTGGACAG CTGCAGCACT ACAGCCCCTT TCTAGGACAT CCCTGAAGGA GAGCAGTGAA GGGAAATGTT 002160
002161 CCCAGTGGGC AGAACTTCGA GCAGTGCACT TTACATGAAA TGAGAAATGG TCAGGTGTGC GATTATATAC TGATTCATGG 002240
002241 GCTGTAGCCA ATGACTTGGC TGGATGGTCA GGGACTTGGA AGAAGAATGA TTGGAAAATT GGTGACAAAG AAATTTGAGG 002320
002321 AAGAAGTATG TAGATGGACC TCTCCGAGTG GTCAAAAACT GTGAAGATAT TTGTGTCCCC TGTGAGTGCT CACCAACAGG 002400
002401 TGACCTCAGT GGAGGAGGAG TTTAATAATC AAGTGGATAG GATGACCCAT TCTGTGGACA CTACTCAGCC TCTTTCCCCA 002480
002481 GCCACCCCTG TCATCGCCCA ATAGACCCAT GAACAAAGTG GCCATGGTGG CAATGGAACA ACAAATGCAA TAACAAGGAT 002560
002561 TGCCCAAATG ATCAGGGCCT TAGGCTTCTA GCCTTTATCC TGAATTGCAT TTGGCAGGTC CCAAGTTCTT GTCCCACATC 002640
002641 CAAGAAGAAT GAGGTTATGC TGACAACCAA AGGATGAGGA GAGTTAGGCT TGTGTGGAAC ATTTAGTGTT CTTCTCTTGT 002720
002721 TATTTTGTTC ACTCTTTAGC TCACTGAAGC AGCATTTCCT CTAGGAACCT CTGAGTACAA AGCAGAGGTC AGAGACCACC 002800
002801 AGGCATCAGG GTAGACTCTG TCTCTCAACC TTCTAGGCCC TCAGCCAGCT TGCAACCTTT GAACACCCAT CTTCTCAGGG 002880
002881 AGTGACTTCA CTACCCACCT GTTACTGCCC CTGCAGTTAA GCGGCAGCCC GAATTTCATA CCTGCATAGG GATCTCAGCT 002960
002961 GGGGGGTTGG TCAGCGGCTT CCAAGCACAC TTTCAACATC TCTCCCAGAA GCTCTTCAAA TCCTCTTGTC ACTGAACCTC 003040
003041 CAGGAGGCCC CAGATGGCCC CCAGCACACT ACACCTGGCT TCATAGCTTA CGCATTCACT CTGATTTTCT AAATGACACA 003120
003121 GAGACGATTC ATTTCTTTGG CCACTTTTCC TAAAGGTACC AGGAACATCC ATGCCTTGTT GGGATTAGCA AAGTGCTAAA 003200
003201 AAGTGTTCTT AAATGTCTCA TGTTTGGCGA TTACATCTC
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Predicted Small Protein

Name NONHSAT053180_smProtein_1577:1792
Length 72
Molecular weight 8159.247
Aromaticity 0.112676056338
Instability index 48.7309859155
Isoelectric point 4.79486083984
Runs 12
Runs residual 0.0204595997035
Runs probability 0.033555614438
Amino acid sequence MVLEVSVVDKDAVWSLWQVPIGESQQRPPGFWSKSLPSCSDNYSPFERQLLACYWALVET
ERLTMGHQVTM
Secondary structure LEEEEEEELLHHHEEEEEELLLLLLLLLLLLEELLLLLLLLLLLHHHHHHHHHHHHHHHH
HHHHLLLEEEL
PRMN -
PiMo -