NONHSAT053260
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT053260 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
524 nt |
Genomic location |
chr17+:35519530..35520053 |
Exon number |
1 |
Exons |
35519530..35520053 |
Genome context |
|
Sequence |
000001 ATGAACGCCT TGGGCACACT ACAAGAGTAC AAGGTGGTGG GTTGCTGCCT GCCCACCCCC AAATGCCACA TGCTGCCCTT 000080
000081 CTATGGTATG CGAATCTTGC ACCTAATCAT GTCATTGTCA AGTCCCGTCT CTGGTACTTG GTATCTCAGC TAAAGAAGAT 000160 000161 AAGGAGTCTT CAGGGAAAAT TGTCTACTGT AGGTAGGTGT TTGAGAAATC CCCCCTGCAG GTGAAGAAAT CTGGCATCTA 000240 000241 GCTGCACTAC GACTCCCGTA GCAGCACCTA CAACATGTAC TGGATATCAG GACTTGACCA CCATGGGTGC TGTCATCCAG 000320 000321 TGCTAGTGAG ACATGGGCAC CTGGCATCAC ACACAGGCCC ACTCCACCCA GATCATGAAG GTGGAGACTG CGGCCAGCAA 000400 000401 GTGCTGCCAG CTGGCGGTCA AACAGTTCCA TGACTCCGAG ATCAAGTTCC CACTGCCCCA TGGGGTCCTG CATGGTTAGC 000480 000481 ATAAGCCATA CTTCACCACC AAGAGTCCCA ACACCTTCTT CTAG |
Predicted Small Protein
Name | NONHSAT053260_smProtein_62:223 |
Length | 54 |
Molecular weight | 6098.2715 |
Aromaticity | 0.0754716981132 |
Instability index | 57.958490566 |
Isoelectric point | 11.0520629883 |
Runs | 6 |
Runs residual | 0.0470547630005 |
Runs probability | 0.0168845315904 |
Amino acid sequence | MPHAALLWYANLAPNHVIVKSRLWYLVSQLKKIRSLQGKLSTVGRCLRNPPCR |
Secondary structure | LLHHHHHHHHHHLLLLEEEHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |