NONHSAT053281
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT053281 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
794 nt |
Genomic location |
chr17+:35911456..35912255 |
Exon number |
2 |
Exons |
35911456..35911977,35911984..35912255 |
Genome context |
|
Sequence |
000001 GGCTCCTTTC TGACAGGAGG TTTACAGATC AATGGGAGGA AACAATCTGC TTTTAAGAAT ATCCTCCAAC TGAAGAGTTA 000080
000081 GCTTGAACAT TACAGGCTCC AAGCTGAGGA TGTTCCAAAC ATACATAAAA GAACATGAGC ACAGAAGATT ATTTTAACAG 000160 000161 GTCAGTAAGA ACAAGCTTGG TCAAAAAAAC CAACCTCCAA ATAAAATGGG GGAAAAAAAA AGACACCCCA AACCCGGATT 000240 000241 AGCCTCATTT CATAAAGACA TCTACCTTGG CACTGTGAAA GAATATAGAT TCACTTTCAG AAAAATAGTT TCTAATTAAT 000320 000321 AACTTCAGAG TCCAAAAGGC TAGTATACAT GTTATGAGAT TTTTAAATAA AAATCCAATA TTGTTCAGAA AACAGAGCAC 000400 000401 TTTGCAACCA ACTGCTGTGG TTCAAGCAGC TCATAAAAAA AAAAACCAAC AAAACAAAAC CCACAATCAC TCTATCAAAC 000480 000481 AAACAGCAGC AAAAAAATAA GAAAATTTCT GAGGAAAAGT ACAAAAAAAA AGACAGAAAG TAGACAGTCA AGGGCACAGG 000560 000561 AGCTCTTCAG ACCGCCCACT GCATTTGAAA AATACCTTAG CAAGTAGCAA CATGAAACAT GCAATGTCTC TGCTAACTTG 000640 000641 CTCCTGATTC AGCAGCCTGT TTAGCAATAC CTACAACATT TCCATAACCA AAGGATGGAT GCAATTTTGT TTTCCGACTT 000720 000721 GCCAATTTGA CATATGCAAA AGCTATAGGA CTTTACAATT TCTGCCTGAA TCTGTAAACT TGGAAGTGTC TCAC |
Predicted Small Protein
Name | NONHSAT053281_smProtein_353:499 |
Length | 49 |
Molecular weight | 5552.4272 |
Aromaticity | 0.0416666666667 |
Instability index | 60.0791666667 |
Isoelectric point | 12.0665893555 |
Runs | 7 |
Runs residual | 0.0197368421053 |
Runs probability | 0.0432407197113 |
Amino acid sequence | MRFLNKNPILFRKQSTLQPTAVVQAAHKKKNQQNKTHNHSIKQTAAKK |
Secondary structure | LLLLLLLLEEEELLLLLLHHHHHHHHHHHHLLLLLLLLLLHHHHHHLL |
PRMN | - |
PiMo | - |