NONHSAT053418

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT053418

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

1556 nt

Genomic location

chr17+:37330081..37340614

Exon number

3

Exons

37330081..37331375,37333457..37333588,37340486..37340614

Genome context

Sequence
000001 TGGCAAAATA CTTCTCCTAG GGGAGTACAG ACAAATATAG ACAGACAGAT GGGGGCACAG GACACCAGAC AGGGAGGGGG 000080
000081 GAAGGGAGGG CAGTGGTGTC TTCTAATCAG TAAGTGGAAG CTGCACCCCA CCCCCAGGTG GAGGGTGGGA CATTGGCACA 000160
000161 GGAGGTGGCG AGACAGGCAT GAGGTGCCCA TCCCTGAGGC GGGCAGCCGG GCAGGCCCCA GTCCTTGTTG GCACACTCGG 000240
000241 CTCTCTCTGG CCCAGCTGGG ATGCTGGGGA GGGGCAGGGT TGCTGGGCTA CAGGGATGCC AAGGCAAAGG GATGCCCCAG 000320
000321 GGGAGAGGGG GTACCAAGGC CTCTCCTGGG GGAAGTGAAC ATGGGTAACA AACAGAATCA CGAGAGGCAA ATACAGAGCA 000400
000401 GCAACAGCAG CAGCCAAGCC CCCCAGAGGA GATCCGAGGT CCCAAGGCAA CCCCTGGGCA CCATCCCACG GGTCCTCTCC 000480
000481 CCTGGGGCCT CAGGGTGAGG GTGAAGGAGC AGTTTTTTGG TTTAAAATGA GGCGGACCAG AGTGTTCCAT GGGCTCCACA 000560
000561 CCCAGGTGGC ACAGGGATGG GGGGCTCAGA TGCAGAGGGG CCCCCTCTAC TAATGGCAGC AGGCAAGGGA TGTTGGAGGC 000640
000641 CAAGCTCATT CCTGGGGTAG GCAAAGGCTG AGGCATGGAG GTGGGGGGTG GGGAGCAGCG TCTCGGCCGC TCACTCCTCA 000720
000721 GGGTTCTGGG CCCTGGACGT TGCCATGGCC ACGGAGGGTA GAGGGTGCTG TATGCCTGCC AGCTTCCACC CAGAACCCTC 000800
000801 CCCAAGACAA GCTCCCCATG GGGTGTCCAT GCTATGGCTT TCACCGACCA GACGATGCTG CCAGGAAGCT GGGAGGAAGG 000880
000881 GGCAGGCAGG GTGAGGGACC TTGGATCTGG GGTCTGGGGA AGAGAGCCCC CATGGGAAAG AATCTGTGGC CTCCCTTTCC 000960
000961 AGGAAAAGCG CCCAGCCCTT CCCCAGTACT GCAGCTTGGG AGAAGGAGAG CCATCCCACT TAGGACCGTC ACTTAGGGCC 001040
001041 CCGAGTAGAA AGAGTTAAGG AAGTGCACCT TTTCTCTAGG AGGGTGAGGG AGGAGAGCCC CTTAAGATGG GAGAAAGGGG 001120
001121 ACACTTCAGA AAGGTGGGTA TCCCCCATCC ATCCACAACA GGCAGGTAAA AACCGACAGC TGGGGCTTAA GGGCCTCCCG 001200
001201 GGAGCTGGGA TGGTAACACC AAAGAAACCC CAAGCTTTGA GCAAAGGCAT CTGAAAGGAG GGAGACAGCG CCCCCTGGAG 001280
001281 GCGAATACAT GTCAGTTCCG ACCCCAGAGC AGGAGGGAAG ACGGGCAGGG CGCCCACTAC ATGGCATGTT CCTGCTCCTG 001360
001361 GGGCACCACA CTGCCCCGCT GTGAGGACTC CAGCCCGCCC CAGAAGCCGA GGTTTCTCCT GAGCGAGTCC GAGTCCCAGG 001440
001441 ATTGTGATTC GAGGCATCCT GCCCATCCCC AGCAGCAGAG AGCAACGGCA GGTGCGAGGA GCAGCTCCCA GGATCTTACC 001520
001521 TGCCATCAAA CCGATGCTTC AAGAAGTCAA ATAAAG
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Predicted Small Protein

Name NONHSAT053418_smProtein_833:1057
Length 75
Molecular weight 8152.1209
Aromaticity 0.0810810810811
Instability index 58.5945945946
Isoelectric point 6.55450439453
Runs 7
Runs residual 0.0480553724456
Runs probability 0.0110025992379
Amino acid sequence MAFTDQTMLPGSWEEGAGRVRDLGSGVWGREPPWERICGLPFQEKRPALPQYCSLGEGEP
SHLGPSLRAPSRKS
Secondary structure LLLLLLLLLLLLHHHLLLEEELLLLLLLLLLLLLLEEELLLLLLLLLLLLLLLLLLLLLL
LLLLLLLLLLLLLL
PRMN -
PiMo -