NONHSAT053421
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT053421 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
563 nt |
Genomic location |
chr17-:37340578..37343692 |
Exon number |
5 |
Exons |
37340578..37340636,37341037..37341117,37342749..37342825,37343046..37343182,37343484..37343692 |
Genome context |
|
Sequence |
000001 agacaggcag ccagagtgct agtggacaaa aggcttctga gccaagcaga gccaggctga atctgctgtg tgaccttaga 000080
000081 caaatctctc cacctctctg agcctcttaa ttttctactg gaaaaatgag gtggtaatgc ttaggtcaga aggttgttgg 000160 000161 gagggttTGT TAGGGGGCCT GAACTGGCAT GGCGGTGTGC CAGGGACATA AATACAATAA TGACTGGTGG ATCGGGCGGC 000240 000241 TGGTGAAGGA GGGCTGTGAG GTTGGCTTCA TTCCCAGCCC CGTCAAACTG GACAGCCTTC GCCTGCTGCA GGAACAGAAG 000320 000321 CTGCGCCAGA ACCGCCTCGG CTCCAGCAAA TCAGGCGATA ACTCCAGTTC CAGTCTGGGA GATGTGGTGA CTGGCACCCG 000400 000401 CCGCCCCACA CCCCCTGCCA GTGACAGAGC ATGTGCCCCC CTATGACGTG GTGCCTTCCA TGAGGCCCAT CATCCTGGTG 000480 000481 GGACCGTCGC TCAAGGGCTA CGAGGTTACA GACATGATGC AGAAAGCTTT ATTTGACTTC TTGAAGCATC GGTTTGATGG 000560 000561 CAG |
Predicted Small Protein
Name | NONHSAT053421_smProtein_188:445 |
Length | 86 |
Molecular weight | 9281.4312 |
Aromaticity | 0.0470588235294 |
Instability index | 62.5035294118 |
Isoelectric point | 9.29864501953 |
Runs | 11 |
Runs residual | 0.00713012477718 |
Runs probability | 0.0470122528946 |
Amino acid sequence | MAVCQGHKYNNDWWIGRLVKEGCEVGFIPSPVKLDSLRLLQEQKLRQNRLGSSKSGDNSS SSLGDVVTGTRRPTPPASDRACAPL |
Secondary structure | LEEELLLLLLLLHHHHHHHHLLLEEEEELLLLLLLHHHHHHHHHHHHHLLLLLLLLLLLL LLLLLEEELLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |