NONHSAT053480
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT053480 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
584 nt |
Genomic location |
chr17+:37896385..37899147 |
Exon number |
3 |
Exons |
37896385..37896434,37898505..37898709,37898819..37899147 |
Genome context |
|
Sequence |
000001 AGCCTGGAAT GAAGTCACTG GGGCTGTTTG GAGACCGGGG CTGTTTGGAG GACAAGGGCA CACAACTGGT TCCGTTAAGC 000080
000081 CCCTCTCTTG CTCAGACGCC ATGGAGCTGG ATCTGTCTCC ACCTCATCTT AGCAGCTCTC CGGAAGACCT TTGCCCAGCC 000160 000161 CCTGGGACCC CTCCTGGGAC TCCCCGGCCC CCTGATACCC CTCTGCCTGA GGAGGTAAAG AGGTCCCAGC CTCTCCTCAT 000240 000241 CCCAACCACC GGCAGGAAAC TTCGAGAGGA GGAGAGGCGT GCCACCTCCC TCCCCTCTAT CCCCAACCCC TTCCCTGAGC 000320 000321 TCTGCAGTCC TCCCTCACAG AGCCCAATTC TCGGGGGCCC CTCCAGTGCA AGGGGGCTGC TCCCCCGCGA TGCCAGCCGC 000400 000401 CCCCATGTGA GTTGTCCCTC AGAAGGGAAG GGAGGGATGC ACGGGTTCTG GGTCTGTGGG AGATACACAG CCGCTTCCAT 000480 000481 GGAGGCAGGG GATCTTGGTT AGGAGTCCCT GAGGGTCTAG CAGGTGCGGA AAGGGAATGA ATCACCCTTT GCCTCCCCTC 000560 000561 AAGTCGTGTG CAATTCCTGG GGCG |
Predicted Small Protein
Name | NONHSAT053480_smProtein_8:217 |
Length | 70 |
Molecular weight | 7489.979 |
Aromaticity | 0.0579710144928 |
Instability index | 49.0753623188 |
Isoelectric point | 9.49639892578 |
Runs | 5 |
Runs residual | 0.0668675563208 |
Runs probability | 0.0406465288817 |
Amino acid sequence | MKSLGLFGDRGCLEDKGTQLVPLSPSLAQTPWSWICLHLILAALRKTFAQPLGPLLGLPG PLIPLCLRR |
Secondary structure | LLLLLLLLLLLLLLLLLLEEEELLLLLLLLLHHHHHHHHHHHHHHHHHLLLLLLLLLLLL LLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLL LLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooooooo ooooooooo |