NONHSAT053643

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT053643

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2466 nt

Genomic location

chr17+:39821818..39824283

Exon number

1

Exons

39821818..39824283

Genome context

Sequence
000001 AGCCTTGGAT TCATCATGGC TTCGACATCG CCGGCCCTGG GCCAGTGTTC GAGAGCATGG CCCCAAACAG TTCTTGCTCT 000080
000081 GTTCAGCTCC CCACATTGCC AAGCTGCGAG CGGGCTCTCT GTGCTTCCTG CCTTCTGTCT GCCTCGCCTG TTCTCTCCAG 000160
000161 GTAGGCGGCT CCTCCTCCAA GCTCCCCCAG CCCTGGGCTG ACCTCTGTCA CCTGGATGGT GGGTGCGGGT TCTCCGGGCA 000240
000241 TGCACCTCGT TCCCCTCTTT ACTCCCAGCA GTGGCTGAAA CTTGTGGGTG CTTGATCGTG CTAGTTAAAT GAATGAACAT 000320
000321 GTGGTGGTTA CAGGCAAACC CACAATGCCA CACAGGACAC CGACCAACAA CTGAAAACGG TGACAGCTGC CCTTACCCGC 000400
000401 AGCTCCCCAG CGTAGCCCTC CCCCATCGCA GCCAGACCGG CTTGCCCACT GCGCAGCAAG GCGGAGCCCC GCACAGCTAA 000480
000481 GCCCGGGCGT GGTGCTCGCG GCGCCCTCTG CTGGCCGGGC CCACGGCCTC CTCCTGCGCA CGCGCGCCGC CACCCCGGGA 000560
000561 CCAGACCTAA AGGGAGAAGG CGCGATCTGG GGCCCTCCCT CCGCACCCCC TCGCCCCGAG AAGCCCCAAA CCCAGGTCTT 000640
000641 TGACCCTCAT GAACATCCTT TGTCCTTCCT CTCTCCTGCT CCCCCTGCAA ACATTTTAGG CATCCCTAAA TGATCACCAG 000720
000721 CCCTCGCCTG CTCTCTTAGC AGGCCTCCAG GTGGGGTTAG AATTGTCAAA TGCTGGCACA GGACGAAACC CTAATAATAA 000800
000801 TAACTATGAT GATGACGGCA GCTGCTGCTG AGCGGGCACT TTGTGGTTAC CTTAGCAACC TTCCACCATC CAGGAAGTGC 000880
000881 AGCCCCTTCT TTCACAGGCG GCAGCTGCAG CCAGAGGCGT GCGGGGACTT CCCAAGGTCA CACAGCAAGA ATCCTAAGAA 000960
000961 ACCCGGGGTG TTTCCTCTGC CTACGTGGAG CTAACCCTGC CTCCAGAAGC AGGGGCCTTG AGATGGGAGC AGAGCGATCT 001040
001041 GGTGCCCCGG AAACCCCACC CCCACCCCCA CCTTGCCCCA TGCGCAGCGA ACGTGGCTAC ATTTCCTATC GTTTGTCCAA 001120
001121 CCCATCATTT TGCCTTTGGG AAAATTGCAG GGGAGGTGGA GGCCAGAGGA CAGGGAGACA AACGTTCGTG GGCATCTGCC 001200
001201 ACGAGCACAT TTGCCACGCT TTGTGACAGG CCCTTTCCCG TTACACACCA CACCTGCCCA GGACCGCAGC ACAGAACCAG 001280
001281 GACCCAAACC CGCCGACTCC CTCCCTAGTG CTCCTTCCTC ACCCCCCACC CCCTCCCCCC TCCGCAAGTT CTCTCTTGGA 001360
001361 AAAGGGGCCG CTGGGAAGGG GAGGAAACGC ACTCACTACA GGACTCCAGG TGGGGTCCAG AGGCTCTGCC CCTGGTGCCT 001440
001441 CTTCCCCAGC CCTAAAGCCC CCAGCCCTAG AGAGGGGACC CTCCTGCACA ACATCTCCAG GGGACCGGGT ACTCCACTAG 001520
001521 GGTCGAGAAA CGTTGAATAG TGCGGTGGGT GCGGGAGGCG CGCCTAGGTG CCGAAACCCG GTCTGTGCTG CCATCCTGTG 001600
001601 GCCATTGCAG GAAGTGTGCC TGTCAGGCCG CTCTGCATTG AACCTGAAAT GCCGGGTCAC CCTTGGGTTG AGTGAAACCG 001680
001681 GGCCCCATGC TGAGGCTACA AGGGACATAG AAAGGGACAA GACGCAGCCC GTGCCCTGAA AGAGCTTACA GTTCGGTAGG 001760
001761 ATGGCCTTCA AATGACATGA TCCAACACTC AACTCGGCGC CAGATACCGC CCAAAATAGA AGATCGTGCA AAAGGTTCCA 001840
001841 AAAGGTGGAG GCAGCCTGCC CCGAAGCACA TCGAGAAAGC CCTCCTGCAG CAAAGCCGTG TCGAGACTGG GCCTTACAGG 001920
001921 GCAGGCGGGG CTGGGGCAAA CAGAGATGAA GGAAGGCGCT CCAGGCGGAG AGACCAGCCT GAGCAAAGGC ACAGGGGCAG 002000
002001 GAAACACGGA TTCTCAGGAA TCCAGCTTGT CCCAAGTCTA GGTCAACTGT GAAGGGGAGA GCAGCATGGC CAGGTCCTCC 002080
002081 AGTGCCCAGG TAGGAGGTTT CACTTAACCC TTTAGGCCAC GCGGCCAACA AAGGTCTTTG AGCAAGCCAG CAGCTTGACC 002160
002161 AGAAGTCTGT CCAGGAAAAG AGCATGATAG CTGGGGAACG GGGGCAAATG GGTGAGGTTT CAGAGCAATT AGGAAGGAAG 002240
002241 GAGAACAGGA GGAGGCATGA GCGACGCGGA TGGTGGTGCC ACTGGCAGAG CTGGGAAGTC AGGGGCCACG CAGGGGAGAC 002320
002321 CAGGGCTGGG GTTTAAGTTC CTGGCAGAAC ATCCCAGTGA AGACGTCCTT CAGGAAGCCA GAAAGAATAC ATTAATAAAA 002400
002401 GAGGAAGTAA TAGTTATTGC TCATATGTGT ACAGACTTTA TAGTAAATAA AGCAGCTTAA TCCATC
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Predicted Small Protein

Name NONHSAT053643_smProtein_1022:1225
Length 68
Molecular weight 7355.2841
Aromaticity 0.0746268656716
Instability index 66.3507462687
Isoelectric point 8.39788818359
Runs 9
Runs residual 0.00898648120653
Runs probability 0.0455062906044
Amino acid sequence MGAERSGAPETPPPPPPCPMRSERGYISYRLSNPSFCLWENCRGGGGQRTGRQTFVGICH
EHICHAL
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLLEEEEEELLLLEEEEELLLLLLLLLLLLEEEEEELH
HHHHLLL
PRMN -
PiMo -