NONHSAT053709

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT053709

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1483 nt

Genomic location

chr17-:40538957..40540439

Exon number

1

Exons

40538957..40540439

Genome context

Sequence
000001 CCCAACCGGA TCCTGGACAG GCACCCCGGC TTGGCGCTGT CTCTCCCCCT CGGCTCGGAG AGGCCCTTCG GCCTGAGGGA 000080
000081 GCCTCGCCGC CCGTCCCCGG CACACGCGCA GCCCCGGCCT CTCGGCCTCT GCCGGAGAAA CAGGTGAAGG GGGTGCAGGG 000160
000161 TGGGGCCGTT GGGGAGGCCT GGGGACCCGG GGGCTCCGCA GCGGCAGGGG GCCTCTGGGA CCTTGGGGAT GTTGTGATGG 000240
000241 ACGCTGCAGT GGGGCCGGGA GAGATGAAGA GACGCGGAGG GTCGCCCTGA GGGAAGACTC TTCGGGATGA CAGGAGCGGG 000320
000321 CCTCGGAAGG GACTCGGGGC GCTGGAGGGA AGTTTCGTTC TTCGGAGAAA CAGAACGCGC TCGAGGGGGC ACCGTGGGGC 000400
000401 GAGGGCGCAC TCGGTTGCGG CGGCAGGAGT GAGGGACAGT CCCCCGATTT CCTGCTCCCT GGGGCCCTGG GGACGTTCCG 000480
000481 GCCACCGGAG CGACTGTCAC GCCGACGGGG ATCACCGGCG CGAGTGGGGG GTCGGAAAGC GCCTCCTCCC CGCCCGGTCG 000560
000561 GCGGCTCCCG CTGAGCCACT TCCTCCGCTT GCCCTGTTCC CGCTCCTTCA GGAGACAGCT GTGCCCTTTT GGAGGCAGGA 000640
000641 ATAGGTGTGT CTGTCGCCTG CAGCCTTACG GGCTGGCTGG TCGTGGGTAG GCTTTATTGC ATAAGAATCA AGTTTCCTGT 000720
000721 AGGGAAATTG ACAGACCGGT ACTCTTTCTA AATTCCCTCG CATCTTTTTC TAGGTTAAAT TATGCTCCCC CCACGTCCCC 000800
000801 GCCTTGTAAA AAAGAGAAAA AAAGACAAAA TAAAATCCCC ATCAACCCGT CAAGCCAGCT CTAGAGAGAG AAATAAACCT 000880
000881 CTTGACATTG TCCTTTTCCA AATACCTGGT AAAGTCGGCC AGAAGATAAA TAATTGAGCC ATTGCATTTA CTGGATTGTG 000960
000961 GTGTTGCTTA ATTGCATAGG ACGGAATGAA CCAATTGAGA GTGGGAGTTT TCTGTCTCAG AGCCAAGATC TTGGGTAAAT 001040
001041 GCAGAGGAGA GGGAAACAAA GACAGGCTGG CCTTGAAAAA ACCATGTGTG CAAACTTTAC ATGCATTTGG GGGGTGTGGT 001120
001121 TGCACTGAAG TTAACAAGAT TCAAACCGTC GCCCAAGTTG GTATTTCCAT GTTTGGTACA CATCACTCTG TGCCATATCA 001200
001201 GGTCGTTGTT AAGTGTGGTG ACAAAATCAG TGGTTAGTCA TTTTTTTAAT TAAAAATGTG TATAGTGTGT ACCTGCTGGT 001280
001281 CTTACTGTAT GTGCAACTAA AGGTTTACAT AGTCTGTGTA TGGGTTGTAA ATTTTTGGCT GGCTGTGCTG ATAAAGCATT 001360
001361 GGGCTTGAAT AAAGCAAAGC AGAAAATCAT CTCAATCTTT TATATGTGGA TTTAGACTGT GTTATGACTT GGTTCAGCCA 001440
001441 GTTTTCTATC TTATTTTATA TTAAATATGT CTGTGTTCTC TGA
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Predicted Small Protein

Name NONHSAT053709_smProtein_1100:1252
Length 51
Molecular weight 5571.761
Aromaticity 0.08
Instability index 62.064
Isoelectric point 10.4805297852
Runs 9
Runs residual 0.0153216374269
Runs probability 0.0424836601308
Amino acid sequence MHLGGVVALKLTRFKPSPKLVFPCLVHITLCHIRSLLSVVTKSVVSHFFN
Secondary structure LLLLLEEEEEELLLLLLLLEEELLEEEEEHHHHHHHHHHHHHHHHEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLL
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