NONHSAT053780

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT053780

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1844 nt

Genomic location

chr17-:41026691..41050751

Exon number

6

Exons

41026691..41026880,41029992..41030090,41030544..41031835,41036612..41036703,41046583..41046651,41050650..41050751

Genome context

Sequence
000001 AAGGGCTCGC ACCCAGCCCA TGCTGACTCC AGTTGTCCTT GACTGCATGG TTTCTGCTGG TCCAAGCAAA CTTCTCCTGC 000080
000081 CACGCCTAAC CTTGGAGAGC AGTGATCAAT GGAGGAAGTG TTTCATGGTG GACATGGGAA ACTGGCCAGA TCAACTGCTG 000160
000161 TCACCTTCTA AAGAGAGGGT TTTGCCATGT TGCCAGGCTG GTCTCGAACT CCTGGACTCA AGTGATCTGC CTGCCTCAGC 000240
000241 CTCCCAAAGT GCTGGAATTA TAGGACCCAG ACGGGGAGGA GGAATGCCAG AGAAGCTGCA GACTCTCCGG CCACGGAGCC 000320
000321 TGAGTGGAGC AGAGGTGGCC CACTGTCAGC CACAGGTCAA GTGTCAGGGT GGGGACGGGG CAGGCTCCAC CAGAAGGCGG 000400
000401 GGGCAGGCTC CACCAGAAGG CGGGGCCAGA CCACAGGGCA AGGTGGAGAT GAGTCTGTGG CACCCCCAGG AAGTTTACCA 000480
000481 GATTTGCCCC AGAGCTTCTG ACCCTTTGGA TCTCTCTGGG CTGCATTCTT CAGGGTCCCA TTGCTTCTTT CTTGAAGGTG 000560
000561 GAAGGAAATG TTCCCATCAG AGCCTTCCAA CAGGCCACCT TGGGGGCTTC TCCTGAGAGC TCCTTGTGCA CACACCCCTT 000640
000641 CAGGGTGGCT TGGGTTGCGC CCTCAGACCC CAGTGGGGGG CCGTATGGCA TCCTCCTTGG TCAGCAAGTG AGCCACAGCA 000720
000721 GCAGGCCCCT CACAGACCTC AGCCTGGGGC CACAGGTCCC TTCTCCCCAT CTCCGCATCT GGAGAAGCAA CCTGTGGAGC 000800
000801 AGCCAAGAGT GGCAGCCCTG GCTCTCTACA GCATTCATTT TCAGGGCAAG ACAGAGCATT TCCACTATTA TGCTCCCCCC 000880
000881 CCCGGCCTTT TTTTTTTTTT TTTGAGACAG GGTCTCACTC TGTTGCCCAG GCTGGAGTGC GGTGGCGCAA TCATGGCTCA 000960
000961 CTGCAGCCTC GACCTTCTGG GGTCAAGTGA TCCTCCCAAT TCAGCCTCCA AATTTCTTTA AACAAAAAAA AATGCAAGAA 001040
001041 AGGCAAAACA AGATATTTAT CTGGGCTGAG AGGGTAAAGA GAAGCTCTAT CTTTGAGCTG AGACACAAAA TGGAAAGAAG 001120
001121 AGGCAGCAGC AGCGGCAGTA GCAGTTCTGC CTTTCCAAAC CTTCCCTATC TAAGTGCTTT CAAGATATGC TGAAAGTCAT 001200
001201 GAATTGAAGT GTGGTTCCCA CGGCTTTAGT CCTTGTATGA AGGTCCTTTT GCTAGAACTT ACTTCCTTTC CAGCCCATAT 001280
001281 GGTTGACCTG GGGGTCCAGG CAGTTCTCAA GGGAACCACA GGATTCCATG TGATCTGGGA TCCCAGTTGA TGATCCCTCT 001360
001361 TCTGGTCACA AGCTGAATTG GACCCAAATC TGCACCCTAA ACTCCCCTCT TGCCAGATCC TGCCCAGTCA GTGCCGTCCC 001440
001441 CTCAGACTGG GTGGGCAGCC TGGGCTTCCT GCTGAGACGG GACCCCCCCC TCTCTTCTTG ATCTCACTCC CAGGAAAGAC 001520
001521 ACTGAAGGAG CAGAGGTGTG GACGCCACAT ACTGGACGGG GTTTCACCAT CTGCTGGGAC GGGACACCCT CTCTTCTTGA 001600
001601 TCTCACTCCC AGAAAAGACA CTGAAGGAGC AGAGGTGTGG ACGCCTCATA CTGCTAGAGA CGGGGTTTCA CCGTGTTAGC 001680
001681 CAGGATGGTC TCAATCTCCT GAAGTCGTGA TCCACCCGCC TTGGCCTCCC AAAGTGCTGG GATTACAGGC GTGAGCCACT 001760
001761 GCACCCGGCT GAAATTGTAT ACTTTAAAGG GATGAATTTT ATGGTATGTG AATTATGTCT CATTAAAAAA AACAAACTGT 001840
001841 TAAG
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Predicted Small Protein

Name NONHSAT053780_smProtein_1031:1192
Length 54
Molecular weight 6193.0647
Aromaticity 0.11320754717
Instability index 81.3113207547
Isoelectric point 10.5188598633
Runs 10
Runs residual 0.0284169351127
Runs probability 0.00686274509804
Amino acid sequence MQERQNKIFIWAERVKRSSIFELRHKMERRGSSSGSSSSAFPNLPYLSAFKIC
Secondary structure LLHHHLLEEEHHHHLLLHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLEEEL
PRMN -
PiMo -