NONHSAT053822

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT053822

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2287 nt

Genomic location

chr17-:41300388..41316185

Exon number

4

Exons

41300388..41300800,41311143..41311256,41311524..41311744,41314647..41316185

Genome context

Sequence
000001 TTAAAGAGTT AAAACAAACT TTACCAATGA AGACAGGATA CCAAGATGCA AATGCCTGGT TAAAATGCAT CAAATATTCC 000080
000081 ATCTGCACGT TAAACAAAAG CAATTGTTAT GCTTGTGCAC ATGGCAGGCC AGAGGCCCAG ATTGTCCCCT TTCCACTAAG 000160
000161 GTGGTCCTCC AGTCGACCAG ATGTGGGCTG CCTGGTAGCT CTTTTCCAGG ATTCTACAGC CTGTATTAAT AAGTCATGCC 000240
000241 AAGCTCTCTC TGCTATATCC CAAAGTCCAG CACCCTGCGG GTCAGCCCCC GAGGGCCATC CATCCTCCAT CTCCCAACAC 000320
000321 TAAGTTCACT TCATGTCTCT CACAACAGGG AGGAAACTTA GCGTTCCTTG GAGACCTGAA AGGATGCAGT TAGCTTAAGA 000400
000401 ATTTTCAAGA GCTTATCAAT CAGTCAGCCC TTGTTCATCC CCGAGCAGAT GTGTGGTGGT ATTGTGGTGG ACCTTTACTG 000480
000481 GGCACTCTGC CAAATAACTG GAGTGGCACT TGTACTTTAG TCCAATTGGC TATCCCTTTC ACCCTGGCAT TTCATCAACC 000560
000561 AGAAGGAAAA AAAGAAAGAC ATTGTAAAGC GAGAGAAGCC CCTTATGGGT CTTTCGACTC TCATGTCTAT TTAGATGCAA 000640
000641 TTGGAGTCCC ACGAAGAATA CCAGATCAAT TTAAAGCTTG AAATCAAATA GCTGCAGGAT TTAAGTCAAT ATTTTAGTGG 000720
000721 GTGACAGTTA ATAAAAATGT AGATTAGATA AACTACATCT ATTACAACCA ACAACAACGA GGTTTTCATG AGTTAAAAGA 000800
000801 AAACCTCATG TTGGTCCCAG CCCTGAGGCT ACCTGACCTG ACAAAACTCT TTACACTCTA TGTGTCAGAA AGAGAAAAAA 000880
000881 TGGCAGTTGG AGTTTTAACC CATACTGTGA GGCCCTGGCC AAGGCCAGTG GCCTATCTCT CAAAACAACT AGACAGGATT 000960
000961 TCCAAAGGCT GGCCCCCAGG TCTAAGGGCC CTAGCAGCAA CAGCCCTGTT AGCACAAGAA GCAGATAAAC TAACCCTTAG 001040
001041 GAAAACCTGA ATATAAAGGC CCCCCATGCT GTGGTAACTT TAATGACTAC CAAAGGACCT CATTGGTTAC AAATGCTAGA 001120
001121 TTAACCAAGT ACCAAAGCTT GCTATGTGAA AATCCCCACA TAACCACTGA AGTTTGCAAC ACCCTAAACC CCACCACCTT 001200
001201 GCTCCTGGTA TCAGAGAGCC TAGTTGAACA TACTGTGTAG AGGTGTTGGA CTCAGTTTAT TCTAGCAGGC CCAACCTCCG 001280
001281 AGACTATCCT TAAACATCAG TAGACTGTGA GGGGTACGTG GACGGGAGTA GCTTCGCCAA CCCCTGCAAA GTGACTCTGA 001360
001361 AGAAGACGAC AAGCTCTGCT CCAGTCACAC CCAGAAGCTG ACTGGTCCAC GCACGGCCGA AGCATGAGAA AACTCATTGC 001440
001441 GGAACTCATT TTCCTTAAAA TTTGGACTTT TACAGTAAGG ACTTCAACTG ACCTTCCTCA GACTGAGGAC TGTTCCAGTG 001520
001521 TATACATCAA GTCACTGAGG CAGAGGACCC TGCGGCCTTC CGCAGTGTTT GTGTCCCTGG GTACTTGAGA TTAGGGAGTG 001600
001601 GTGATGACTC TTAACGAGCA TGCTGCCTTC AAGTATCTGT GATGTGAGGA GCGCCTCTGC CCGGCCGCGA CCCCGTCTGG 001680
001681 GAGGTGAGGA GCATCTCTGC CCGGCCGCCC CGTCTGAGAA GTGAGGAGAC CCTCTACCTG GCAACCGCCC CGTCTGAGAA 001760
001761 GATCTCTGTC GAGAGGCTGG AGTGCAGTGG TGCTATCACA GCTCACTGCA GCCTCAACCT CGCCAGGCTC AAGCGATCCT 001840
001841 CCCACCTCAG CCTCCAGAGT AGCAGGGACT ACAGAGTCAT TCTTATAGAA GAGCATCAGA GGAAGATAAA AAAGAATCCT 001920
001921 CAATGTCAGG CCCCTGAGCC CAAGCTAAGC CATCATAACC CTGTGACCTG CACATATACA TCCAGATGGC CTGAAGCAAC 002000
002001 TGAAGAACCA TAAACGTGAA ATAGCCAGTT CCTGCCTTAA CTGATGACAT TCCACCATTG TGATTTGTTC CTGCTCCACC 002080
002081 CTAACTGATC AATTGATCTT GTGACATTCC TTCTCCTGGA CAATGAGTCT CAGGAGCTCC TCACCAAGCA CCTTGTTACC 002160
002161 CCCACCCCTG CCCACAAGAG AAAACGCACG TTAACTGTAA TTTTTCCACT ACCTACCCAA ATCCTATAAA ACTGCCCCAC 002240
002241 CCCATCTCCT TTTGCTGACT CCAGGTGATT AAAAAACTAT TGCTCAC
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Predicted Small Protein

Name NONHSAT053822_smProtein_26:322
Length 99
Molecular weight 10501.8669
Aromaticity 0.0714285714286
Instability index 81.6734693878
Isoelectric point 8.46734619141
Runs 14
Runs residual 0.00381460995613
Runs probability 0.043215484392
Amino acid sequence MKTGYQDANAWLKCIKYSICTLNKSNCYACAHGRPEAQIVPFPLRWSSSRPDVGCLVALF
QDSTACINKSCQALSAISQSPAPCGSAPEGHPSSISQH
Secondary structure LLLLHHHHHHHHHHHHHEEEEELLLLEEEELLLLLLEEEELLLLEELLLLLLLLEEEEEE
ELLHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -