NONHSAT053925

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT053925

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1799 nt

Genomic location

chr17+:42299283..42301069

Exon number

3

Exons

42299283..42300186,42300193..42300634,42300640..42301069

Genome context

Sequence
000001 AGTTGCGGGG ATTTTTCAAG AAGCAGCAGC TACCCCGGCG TCGGTCACTG GGCCGGGGTA GGGGAAAGAG CAAAATCCCA 000080
000081 GTGGGTTTGC GCGAGGGATC TTCTAGGGTC GAGGCGGGTG TGGGGGGAGT TGGAACCGGG AGACACCGCT TGGCGCATCT 000160
000161 CTCCCTCGGT CTCTACCTCC TGTCCTATGC CAGCTCCCCC TTTAATTTTT TTCCTCTCCT TTAATCTAAT TTCTTCCAAC 000240
000241 TCCACCTTTG TTGTTACCGG CGTCACACCC GGACCAGCCA ATCCCCGCCA CGCAATCAGC TTGTCAAAAA GCCTCGGCCA 000320
000321 TCCCTAGGAA AGCAGGCCGC AGGCGCTGCC CCCCGGCGGC GGCGGGCAGC CGCGAGGGGA GCCCAGCACC CGGTTCTCGC 000400
000401 TGCCCCGGGT GGCAGCGGGG CAGCCTCCGA CAAGACGTCC CTTGGTTCAC TGTCCTGCAG GCCGGGGATG AAAGGCCTGG 000480
000481 ACAGGGTCCA CCACCCACTC TCCCACTGCC ACGGCCGTGG TTGACTGTCT TTGCCTCCCC TTTTCAGAGG AAAGGTTATC 000560
000561 AGGACAGGAC GCAGGGAGCC AGAAGACCAT CTGAAGGAAG CCTGCTTCCA ACGGGCCCAG CCTCCAGCCA CCGCTCCTGG 000640
000641 GGCAGCGCCA TTGCTCCTGG CTCTCAGGCT GCCAGTCTCC CACACCGACG CTCTACTGCC CGCATCTCGG CCAGCTGGGT 000720
000721 CACCCAGCCC CTTTCGACTC TCCCCTGGCA CGCAGCCTTC TCCTTCACTC GGCCTGCCTC GCTGCTGCTG TAATTCCTCT 000800
000801 TGTCTCCTGG GAGAAATGAG ATTGCTTTCC CAGGACTTCC ACATCCCACT TCTATCAGGT TTCACCAACA GGGAGGAAGC 000880
000881 CCTGTCAAGA TCTGGTGTGT CCTGTTTTTT TTTTTTCCCA GAGGGCACTG GCATGTAGGA GAAGCGGATT TACCACTAGT 000960
000961 AGATGTTAAT GAAATTTCAG CTTCTAGGCT CCTAACTTGC AGGACCTGCC CAAGGCCCTG AACTTAATTT TGTTTTCATC 001040
001041 ATTTGGTATT TTTTTGTTAA AAGAGCCACC GACCACCTCC CCGCTACCCC AGAACTGCAC GTGTTTCTGG CCCTACAAAC 001120
001121 CCAGATCGTC CCTTGGAATA TACACAGGGC AATTTGTGTA GGATCACACT GCGCTAAAAG TGAGGCATGG TGGGCTAGGC 001200
001201 GCACTGGCTC GCACCTGTGG TCCCAGCACT TTGGGAGACC AAGACAGGAG GTCTTAAGTG ATTAAGCCCA GGAGTTCGAG 001280
001281 ATCAGCTTGG ACAACATAGC AAGATGCTGC CTCTACAAAC ACACACACCC CCTATTATAA TATGTCAAAA AAAAAAAAAA 001360
001361 GGAAAAGTGA GGCATAGAAC TGACTTTATT GTTTTGACTA GGAAAGAGCA AAGGGTTTGG AATCAAAAGT CCCAACTTCC 001440
001441 CCACCTTCTT AATAGTGTGT GAATCTGAGT GCCTTATTAA CCTTCCCTGG TCCCAGTTTC GTATCTGTAA AGTTAGAATA 001520
001521 GCAATCCTGT TTAATTTGCT TCTCTCACCA GGGATCAGAA GGCCAAATGA GATGATGTAT GTAAAATTGT AAAGTCCTCC 001600
001601 ACAGATGGCA CTTGCCACAT TACAGAGAAC TTGAGACCCC CCCCCCACCA ATAACGTTCC AAATCTTCCA CATGCAGATC 001680
001681 TGGAGTCCAG GTGTCCTGGC TCCTGGCCCT GAACTTTTTG GCTGGGCCAA GGGGCTTTTC GGTAAAGTGC TTTGGTGCTT 001760
001761 TGGAATAAAA CAGGATGAAC ATGAAAAAAA AAAAAAAAA
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Predicted Small Protein

Name NONHSAT053925_smProtein_815:937
Length 41
Molecular weight 4526.135
Aromaticity 0.15
Instability index 59.1325
Isoelectric point 5.50994873047
Runs 7
Runs residual 0.00302419354839
Runs probability 0.0308627955687
Amino acid sequence MRLLSQDFHIPLLSGFTNREEALSRSGVSCFFFFPEGTGM
Secondary structure LEELLLLLLLLLLLLLLLHHHHHHLLLLEEEEEELLLLLL
PRMN -
PiMo -