NONHSAT054360
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT054360 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
482 nt |
Genomic location |
chr17+:46048531..46051221 |
Exon number |
2 |
Exons |
46048531..46048675,46050885..46051221 |
Genome context |
|
Sequence |
000001 GAGCTGGGTG TGCTGGGGAC TGGCCGCGGA CCCCTAACCT GTGTCTCCGG TCTCCCTCCG GAAGCGGCTC AACCCAGCCC 000080
000081 ATCGCTCTGG CCCCGTTCTG GCCCTGCAGG GTGGTGGTTG GGACGTTGAA ATGAGCGCGC GAGTGATTGG CTGGTGGACA 000160 000161 GAAGGCACTG CAGCCTGAAA TGGCAGAGTC TGGTGCTGAC GATCCGCGAG AAGATCAATG CTGCCATCCA GGACATGCCA 000240 000241 GAGAGCGAAG AGATCGCCCA GCTGCTGTCT GGGTCCTGTG AGTGCTTAGG GGCTGTCACT GGAGTCCCCT CTTTGCTGAG 000320 000321 GTAGTATGTA TCAGCTGAGC TACTCTCTTG TTATTTAGCC ACCAGGGCTG GCCTTTAGAG AGGGAGCGAT TTTTATTTGA 000400 000401 GGTATAGATG CTGGCTTCTT CCACTATGAA ATGATTTAGG GAAAAGCTAC ACACTAAAGT TACTGGCAGT ATATTATACA 000480 000481 TG |
Predicted Small Protein
Name | NONHSAT054360_smProtein_179:280 |
Length | 34 |
Molecular weight | 3732.0695 |
Aromaticity | 0.030303030303 |
Instability index | 48.5727272727 |
Isoelectric point | 5.42510986328 |
Runs | 5 |
Runs residual | 0.0326086956522 |
Runs probability | 0.0111641052818 |
Amino acid sequence | MAESGADDPREDQCCHPGHARERRDRPAAVWVL |
Secondary structure | LLLLLLLLLLLLLLLLLLLLHHHLLLLLLEEEL |
PRMN | - |
PiMo | - |