NONHSAT054475

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT054475

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1819 nt

Genomic location

chr17+:46830277..46832095

Exon number

1

Exons

46830277..46832095

Genome context

Sequence
000001 GGCAGAGCCG GGGTGCCGGG TGGGGGCAGG CTCGGGGGCC TGCCTGCGGT GAATCAGGCT TGTGACCTCA GGCCGTCCAG 000080
000081 GTAAACATCC TCTGCGCTTT GGAAACTGTT GGGACTAGAA AGGAGCGGGC GGCAGGGAGA GGGAAGGGGG AAGGAGGGAT 000160
000161 TCTGAGTGGA GGAGACCTCT GAAATCCTCT CTCCTGCCAG GAAACCAGGG CGGTCTTCCA AGCGGGCAGC CACGTTGCCT 000240
000241 ACTTGAGGCC AAGGCAGAAG CATCAATCAC ATGGGGCGTA GTTTCTGTCT GGCTAAAGAA CGGCTCACGC GGACCTCGGG 000320
000321 AATGCGACTG TGGAAACGAC GGGGAAGCTG GAAGGGCTGG GTGGCGGGGG AAGCTGGAGG GCACAGCTTC CAGATTCCAG 000400
000401 TTTGTTAAGA ATCACCTGAA GGACGTTTCT CTGAAGGGAA AGTGGGCATC TGTGAAGGGT TAGAGGCACA TACTTCAACT 000480
000481 TTCCCTAGCA CAAGAGTGGA AATCCATACT CCTTGGGGAG GGACTTTGTC ACTGAACCTT AAGAAAATGG TTACTGgact 000560
000561 gagcttggtt acttatgcct gtaatcctga cgttttggta gatggaagtg ggagcatcga ttgaggccag gagttctagc 000640
000641 ctaggcaatg tagtgagact ctcatcgaaa agaaaataaa aaaAAGAAGA AAGAATCTCG TGGCTGTCAT TTTTAATGTT 000720
000721 GCTGGTGTGC AGGGAGGCTG TTTTGACTCT TATTTCCATT CTTGGGCCAC CGGCagagca gggcaaagct atgaggttac 000800
000801 atagacctgg cttagacccc agtcccattc cccagcagct tcaggcccaa gcaacggtct ccatctccct gaacacagtc 000880
000881 tccttatagg taaaataact gcagagttga tgctggaatt aaatcaatgc aGTGGCGAGC CCAGCGCTGC AGAGCCCCGT 000960
000961 GCTTAGTGAC CAAAATAATG TCCCGCCTGC CTCATCTTCC TCTCGGATTT TTGCCAAGGC CAAACTGCGC GTGTCCCAGA 001040
001041 AAAAAACCCT CGGACACTTG GCCTCTGCCC TGTCTCAGCC GAGTGACTAG GATGACTGGG AAGTGAATCA CAGGAAAATC 001120
001121 ACCCAAGCCC ACTCTTCTCC ACAGCCGGTG AGCAgaagga aggaagcaaa gaaggaaggg aggaagggaa gaagggagAG 001200
001201 TTCAGTTCCC TTTCGTCGTT CACACAGTGG TCCTCCACAC CAGGAAACCT AAGGGCTCTG TGGAGGGCCA GGTGCCGTGG 001280
001281 CAGCAACACT CCTCAGGGCC TGTTTCAGCA CCCCATTTAC GTGGCACATG AAAAATTCAG GATGAACGCC CTGGCTGAAA 001360
001361 GCTCTTCCTG GGTTTGGGAC ATCAGAAGAC CTTCCCGGGA TGGGCTCTTG TCTCTGCAGT AGCTATGACC TGCACATAAA 001440
001441 CCTGTTTCCT ACACTGTAAA ATTGGCGTAA CCACCATTCC CTCCCAGTCT TTCTCTGGAG TCCTAATGGG AACAGTGACG 001520
001521 GAATGAAAGT GACCACGCTG GAACCCGAAG CGCTGTTCCC CTCCGTGGCT TCACACTGAT CTCCACACTA GAATTCCGTG 001600
001601 TCTGCAGTTC AAGTTCAAAC TACTGTGGTC GGGGAAGGGC TACAGAGATC TCGCTTGGCC GTGGAGTCAC CGGCCCCGTC 001680
001681 CAGTCTTGCT TGGGACACAT ACTGGTttac actctctcgg gttcagtttc ctcatctgta aatggggctc gtatccccct 001760
001761 cataaagtgg tttgggggat aataaagctt gtaaaagcgc tttgccccag tgcttggca
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Predicted Small Protein

Name NONHSAT054475_smProtein_926:1105
Length 60
Molecular weight 6802.2173
Aromaticity 0.0508474576271
Instability index 42.9644067797
Isoelectric point 11.2614135742
Runs 7
Runs residual 0.0258124708443
Runs probability 0.0351527998586
Amino acid sequence MQWRAQRCRAPCLVTKIMSRLPHLPLGFLPRPNCACPRKKPSDTWPLPCLSRVTRMTGK
Secondary structure LLLHHHLLLLLLHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEELLLL
PRMN -
PiMo -