NONHSAT054552
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT054552 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
470 nt |
Genomic location |
chr17+:47770012..47770481 |
Exon number |
1 |
Exons |
47770012..47770481 |
Genome context |
|
Sequence |
000001 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaGAT AGGTTTTGTC AAAGAGTGCT GGAGCCCAGA GGACTCAAGA 000080
000081 CACTGTTAAT TCACTCTCTC CTTTCCTTTA GCAAAAGAGG CCCTAAACAA TTGAAGGTCC ATGCCCCACT GTCTCTCCAA 000160 000161 CCCCACATTC CCCCTTCTGA GAACAGACAC AGCCCGTACC ACAGTCCCTT ATATGCCTCT GCCTCTGTTG GCCACTCTGG 000240 000241 GACAGGAACC AGAGTTAGAA CTTGGAGTCT GGGCTGAGTC AACACTGTCT GTGGGAGAGA TGGCTTCCTG GGAAGTCTGG 000320 000321 CTTCAAAGCT TCTGACTGGC CAAGCACGAG GTACCATGGA GGCTGGGGGT GGCTTTGACT TTCAAAGTAC CTCTCACTAG 000400 000401 AGACACAATC ATGGGATAGA AGTTTCCATA GTCTAGGCCA GGCGTGGTGG CTCACCTGGA TTTCACCCGC |
Predicted Small Protein
Name | NONHSAT054552_smProtein_140:334 |
Length | 65 |
Molecular weight | 7160.1831 |
Aromaticity | 0.09375 |
Instability index | 67.3234375 |
Isoelectric point | 4.30035400391 |
Runs | 10 |
Runs residual | 0.00765625 |
Runs probability | 0.0373255608549 |
Amino acid sequence | MPHCLSNPTFPLLRTDTARTTVPYMPLPLLATLGQEPELELGVWAESTLSVGEMASWEVW LQSF |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLHHHHLLLLLLLEEEELEEEEEELLLLLLEEHHHH HHLL |
PRMN | - |
PiMo | - |