NONHSAT054565
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT054565 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
548 nt |
Genomic location |
chr17+:47899047..47901005 |
Exon number |
2 |
Exons |
47899047..47899152,47900564..47901005 |
Genome context |
|
Sequence |
000001 TTTTCTGGAC CACAAGACAT TATATTATGA TGTGGAGCCC TTCCTGTTCT ATGTTATGAC AGAGGCGGAC AACACTGGCT 000080
000081 GTCACCTGAT TGGATATTTT TCTAAGGAAA AGAATTCATT CCTCAACTAC AACGTCTCCT GTATCCTTAC TATGCCTCAG 000160 000161 TACATGAGAC AGGGCTATGG CAAGATGCTT ATTGATTTCA GTAAGTGAAA ctgctaagtc attagttcca caaggcaggg 000240 000241 accatgtgaa tattgtttgt ctttttgtcc tgtggtctct gcaattcctg gaatatagtg aaggtacatg gatatttagt 000320 000321 aaatgaatga aCAAGTAGGA AAAACCTGAA CATTGTCATT CTGCCTAATA CACATTGAAC ATTGAAGGAG TACAGGACTC 000400 000401 CTCCTTAATG AGTAGGAGGT ACAGAGGATG ATAAAGTAAG CTCTTTAGGA TTATCCCAGT TTGAGACTTT TAAACAGCAC 000480 000481 ATACATGCAT GAGGCTTAAA ATCTGGTCCT TGATGCTAGG GATTTCACTT TTGTAGGGAC TTGTCTAG |
Predicted Small Protein
Name | NONHSAT054565_smProtein_176:325 |
Length | 50 |
Molecular weight | 5616.5334 |
Aromaticity | 0.122448979592 |
Instability index | 48.2795918367 |
Isoelectric point | 6.51702880859 |
Runs | 10 |
Runs residual | 0.0420297848869 |
Runs probability | 0.04063769652 |
Amino acid sequence | MARCLLISVSETAKSLVPQGRDHVNIVCLFVLWSLQFLEYSEGTWIFSK |
Secondary structure | LLEEEEEELHHHHHHHLLLLLLEEEEEEHHHHHHHHHHHHLLLEEEELL |
PRMN | - |
PiMo | - |