NONHSAT054591
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT054591 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
610 nt |
Genomic location |
chr17-:48195417..48207160 |
Exon number |
3 |
Exons |
48195417..48195691,48202281..48202335,48206881..48207160 |
Genome context |
|
Sequence |
000001 CCTCCCGTCA GGTCTCCTGG TCCAGCCCCG CCCGCGCCTC CTGCTTCCAG CGAACCTGTT CCCTCTCCCC ACATCCCCCG 000080
000081 CCCTCCATCT CCCCCGGCTC TGGGACCCTT CCCGCCGACC TCACCCCCAC CCCCGGGATG GAGCGGCTCG Agcccgcccg 000160 000161 gagccccccg cggccggggT GACGGTCCCC CCACCCCTCT CCTGCCCGGC CCCCGCCTCG AGCACCATGG GCCTGAGGGG 000240 000241 TTCCCGGGGC GCCAGACGCT GAAGATGACC GATGCCGGAG CTCTCTTGAG TCATGGCTTC TTCAAAGCTC CGAGAACCCG 000320 000321 TGGATGAAGT TTTTGACCTG GACTTGGCTG TGCCAGAGAC GGCCAGACTG GACAGCAGTT TACACAAGGC CCGGGCCCAA 000400 000401 CTGTTGGCCA AGGGCCGGAG ACACCGGCCA TCCCGCTCCA GGCTTCGGGA CAGTGCCAGC TCCGCGGAGG ATGGTGAAGG 000480 000481 CTCGGATGGG CCCGGAGGCA AGGTTGGGGC AAGTTAGGAA AACACATATA CACCCTCCCA CCCCTCCCTC TCCTCCCACC 000560 000561 CCTGGATAAT CTCTCCAGAG TGCTCTTCCA GGGAAACCAC ATCCCCAGAC |
Predicted Small Protein
Name | NONHSAT054591_smProtein_323:568 |
Length | 82 |
Molecular weight | 9034.3932 |
Aromaticity | 0.0864197530864 |
Instability index | 49.7111111111 |
Isoelectric point | 11.4917602539 |
Runs | 13 |
Runs residual | 0.0183141198594 |
Runs probability | 0.0404046580517 |
Amino acid sequence | MKFLTWTWLCQRRPDWTAVYTRPGPNCWPRAGDTGHPAPGFGTVPAPRRMVKARMGPEAR LGQVRKTHIHPPTPPSPPTPG |
Secondary structure | LLEEEEEEELLLLLLLEEEELLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHLLLLLLEE LLLEEELEELLLLLLLLLLLL |
PRMN | - |
PiMo | - |