NONHSAT054624
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT054624 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
682 nt |
Genomic location |
chr17+:48294480..48331947 |
Exon number |
3 |
Exons |
48294480..48294830,48330793..48330865,48331690..48331947 |
Genome context |
|
Sequence |
000001 CAGCCAAGGA TGCACTCTTC CAGCTCTAGG TGGCCAGAGA CCAGGGTAAC AGGACAATTC CCCCCACCCA ACTACATTTC 000080
000081 ATGGTTCAGA CGACAGACTT AATGGCTATA GAATTTTCCT AAAGTGTGGT TCATGGACCA CTGGGGGGGT CCCTAAAGGT 000160 000161 ATACAAGTGG TCCATAGGAA ACCTCTAAGG AAAAAAAGGA TGGAATTGCT CTACTCATAA ATCTGAAATG CAAAATTGAT 000240 000241 TAATTGATTA AGATTCTTGC AACAATCCCA TCTTGTACAT TTATCTATCT ATCTATCTAT CTATCTATTT ATTTCAGAGA 000320 000321 CAAGTTCTCA CTCTGTCCCT CAGGCTGGAG TGGCATGGTT CATGGAATTC CAAAACAATT GCAATAGTAA CATCAAAGAC 000400 000401 CACTGATCAC AGATCATCAT AACAAGCACT TTGGGAGGCT GAAGCGTGTG GATCACGGGT GGATCAAGAG ATAGAGACCA 000480 000481 TCCTGGCCAA CAGGGTGAAA CCCCGTATCT ACTAAAAATA TAAAAATTAG CCGGGCTTGG TGGCAGATTC CTGTAATCCC 000560 000561 AGCTACTCGG GAGGCTGAGG CAGGAGAATC ACTTAAACCA GGGAGGTGGA GGTTGCAGTG AGCCGAGATT GTGCCACCAC 000640 000641 ACTCCAGCTG GTGACAAAGT GAGACTCCAT CTCAAAAAAA AA |
Predicted Small Protein
Name | NONHSAT054624_smProtein_80:121 |
Length | 14 |
Molecular weight | 1485.7209 |
Aromaticity | 0.0769230769231 |
Instability index | 52.5230769231 |
Isoelectric point | 3.66571044922 |
Runs | 4 |
Runs residual | 0.021978021978 |
Runs probability | 0.0289922275217 |
Amino acid sequence | MVQTTDLMAIEFS |
Secondary structure | LLLLLHHHEEELL |
PRMN | - |
PiMo | - |