NONHSAT054705
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT054705 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
536 nt |
Genomic location |
chr17-:48704393..48709301 |
Exon number |
2 |
Exons |
48704393..48704701,48709101..48709301 |
Genome context |
|
Sequence |
000001 ACTTTGCTTT TGAGTGTTCA GAACCAAGAT GGTTCTTGCT GGAAGGGCTC CGGAGAAGCA GTAACGGCCT TGTGGGTTGG 000080
000081 GCTGCAGCAG AGAAATGGAC CAAACCTCCC CCAGCCTTCA TGGCCCAAGC CCCATCCTCC CTCCCCAACT GACTGCTGCT 000160 000161 CCAGGCAGGA TGGATGGAGC ATGTGCGGTG CCTCCCCCGC AAAAATGATG ACGAGGTTAA AGGAAAAAAT AAGTTACATT 000240 000241 ACAGTTTCCA AAATGGTTCT CGCTCTCCGC TGAAGATGGG CCACCGTTGG GGCTGCAATG TGCTCGCGGT CCCAGCTTGT 000320 000321 GCTTTGCAAG AAGAGGGAAT ATAACTAGAC TGTTATTTTA GGTTAAAATA GCCAAGAGAC AGACGCCTTC GCCTCAAAAA 000400 000401 TATTCTGAGA CACATAAAAG TAGAAGGAAA CAAGTCTCTT CAGTCACAAA ATGTCGTACA TCCCGCATAT ACTAGATTCA 000480 000481 ATTAATTTAA TAAAATAGAA TATACATAGA AAAAAAAAAA AAAAAAAAAA AAAAAA |
Predicted Small Protein
Name | NONHSAT054705_smProtein_173:343 |
Length | 57 |
Molecular weight | 6349.252 |
Aromaticity | 0.0535714285714 |
Instability index | 78.4410714286 |
Isoelectric point | 8.98736572266 |
Runs | 11 |
Runs residual | 0.0431303669009 |
Runs probability | 0.0321578262755 |
Amino acid sequence | MEHVRCLPRKNDDEVKGKNKLHYSFQNGSRSPLKMGHRWGCNVLAVPACALQEEGI |
Secondary structure | LLEELLLLLLLLHHHLLLLEEEEELLLLLLLLLLLLLLLLLLEEEELHHHHHLLLL |
PRMN | - |
PiMo | - |