NONHSAT054802
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT054802 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1016 nt |
Genomic location |
chr17+:53249198..53250213 |
Exon number |
1 |
Exons |
53249198..53250213 |
Genome context |
|
Sequence |
000001 TAGCCTCCAA ACTGTGAGAC AATACATTTC TGTTGCTTAA GCCACTCAGT TAGTGTGCTT TATTTTGGCA GTCTTAGCAA 000080
000081 ACTAATACAT CCCCCAATCC AGAACTGTCC TCCTTTGGAT AATAAAAACA GCAATAATTA TAGTGTCATT ACCCTGAGTG 000160 000161 ACTGGTCCCA CTGTTGGTCA TTCTTTGTAG ATGTGAGTTA TTGCCCTATT GAGATCAGAA GTCCTCTCAC TTAGAGGCAT 000240 000241 ATCTAAGACT TTTTTCTTGT GGAGGGAGCT CACTCAACTG TAGGTAAGGT TTGACTCATC TGGGTTAGTA GTAAGAACAA 000320 000321 ACTTCCAAGT GGCACCATCT TAAAGGTGCA AGCCCATGTG GGCGATGACC AGGTCTGGTA TATTAAGAGG CTCTTGGTAG 000400 000401 CACATTAGAA ACACCTGGAG AGATTTTAAA ATTTACAAAG CCTAGCCAAA CCCCAGACCC ATTAACCCTG ACTCTCTGAG 000480 000481 AATAGGACCC TGGCACCTGT GTTTTAAGGA TTCTAGGTGA TTTCAATGTG TAGCCAAGGT TCACTGCCAT AGCCTGTCCT 000560 000561 GGAATGCAGG TAACTAAAAC TTCAGCAGAT TATGAAAAAC AAAAGTTACT TTCTTGGATG CATATATTCT TATAGCCTCA 000640 000641 AAACTGAAAC TGCAAACTGA ACAATGCTGC AGTCAGATAC ACACACATAT TTCAACTGCA TAACTTCCTT TAATAATACT 000720 000721 TTTATTTTTC CAAATTTGAA GACTGTCCCT AAGTCATTTC TTCTAAAAGT TAGTAATAAT CCCACCAACT CACATTTACA 000800 000801 TAGAAGTTAC AGTTTAAAGT TTGCATCTCG TAATAACTTG GTGAGATAGG GCAAGCATTA TTTCTAATTT GCATATGAGA 000880 000881 AAAAACTAAG GCTCGGATGA GTTATGTGAC TTCCCTGAGT CATGTTAGAG TAACTAACTC CTGATTTGTA AACTGAAGGT 000960 000961 CCCAAATCCT GGGAACTCCC TCAGCTCTGG GCAAGCCAGG ACAGGTAGGT CACCCT |
Predicted Small Protein
Name | NONHSAT054802_smProtein_563:634 |
Length | 24 |
Molecular weight | 2798.2819 |
Aromaticity | 0.130434782609 |
Instability index | 53.2391304348 |
Isoelectric point | 8.21124267578 |
Runs | 5 |
Runs residual | 0.0103519668737 |
Runs probability | 0.0102455396573 |
Amino acid sequence | MQVTKTSADYEKQKLLSWMHIFL |
Secondary structure | LEEEELLHHHHHHHHHHHHHHHL |
PRMN | - |
PiMo | - |