NONHSAT054802

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT054802

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1016 nt

Genomic location

chr17+:53249198..53250213

Exon number

1

Exons

53249198..53250213

Genome context

Sequence
000001 TAGCCTCCAA ACTGTGAGAC AATACATTTC TGTTGCTTAA GCCACTCAGT TAGTGTGCTT TATTTTGGCA GTCTTAGCAA 000080
000081 ACTAATACAT CCCCCAATCC AGAACTGTCC TCCTTTGGAT AATAAAAACA GCAATAATTA TAGTGTCATT ACCCTGAGTG 000160
000161 ACTGGTCCCA CTGTTGGTCA TTCTTTGTAG ATGTGAGTTA TTGCCCTATT GAGATCAGAA GTCCTCTCAC TTAGAGGCAT 000240
000241 ATCTAAGACT TTTTTCTTGT GGAGGGAGCT CACTCAACTG TAGGTAAGGT TTGACTCATC TGGGTTAGTA GTAAGAACAA 000320
000321 ACTTCCAAGT GGCACCATCT TAAAGGTGCA AGCCCATGTG GGCGATGACC AGGTCTGGTA TATTAAGAGG CTCTTGGTAG 000400
000401 CACATTAGAA ACACCTGGAG AGATTTTAAA ATTTACAAAG CCTAGCCAAA CCCCAGACCC ATTAACCCTG ACTCTCTGAG 000480
000481 AATAGGACCC TGGCACCTGT GTTTTAAGGA TTCTAGGTGA TTTCAATGTG TAGCCAAGGT TCACTGCCAT AGCCTGTCCT 000560
000561 GGAATGCAGG TAACTAAAAC TTCAGCAGAT TATGAAAAAC AAAAGTTACT TTCTTGGATG CATATATTCT TATAGCCTCA 000640
000641 AAACTGAAAC TGCAAACTGA ACAATGCTGC AGTCAGATAC ACACACATAT TTCAACTGCA TAACTTCCTT TAATAATACT 000720
000721 TTTATTTTTC CAAATTTGAA GACTGTCCCT AAGTCATTTC TTCTAAAAGT TAGTAATAAT CCCACCAACT CACATTTACA 000800
000801 TAGAAGTTAC AGTTTAAAGT TTGCATCTCG TAATAACTTG GTGAGATAGG GCAAGCATTA TTTCTAATTT GCATATGAGA 000880
000881 AAAAACTAAG GCTCGGATGA GTTATGTGAC TTCCCTGAGT CATGTTAGAG TAACTAACTC CTGATTTGTA AACTGAAGGT 000960
000961 CCCAAATCCT GGGAACTCCC TCAGCTCTGG GCAAGCCAGG ACAGGTAGGT CACCCT
[back to top]

Predicted Small Protein

Name NONHSAT054802_smProtein_563:634
Length 24
Molecular weight 2798.2819
Aromaticity 0.130434782609
Instability index 53.2391304348
Isoelectric point 8.21124267578
Runs 5
Runs residual 0.0103519668737
Runs probability 0.0102455396573
Amino acid sequence MQVTKTSADYEKQKLLSWMHIFL
Secondary structure LEEEELLHHHHHHHHHHHHHHHL
PRMN -
PiMo -