NONHSAT054832
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT054832 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1340 nt |
Genomic location |
chr17+:54305683..54307022 |
Exon number |
1 |
Exons |
54305683..54307022 |
Genome context |
|
Sequence |
000001 GTGGTCACAG ACTGTTTCTT GTTTAACGGC ATGGTGGTAA CCTTAATAAT TCCTTCCTGT GTGTACTGCG TTATGGCCAC 000080
000081 TCTGTAAACC CGTATTCTCT CCAGAACTAA TCTCCTGTGT ATTATGTTTC TTTATTCTTA GTACTTCCAG TGTCTATACC 000160 000161 CAAATTACAA ATCCCCTCTA TTCTGAAAGA CCAAAGAAAA TTTTAGCAGA TCTGAACTGG GAGTTCTGAG TTTTGTCTTT 000240 000241 GGAATTAGGG TGATTTTTTT TTTCTTTTTT AATGAAATGA AGGTAAGAAT AATTTTAACA AAGGAAAAAA AGAAAGTTTC 000320 000321 ATATGTCTCT GGTGTAATTT AATAATATCC AATTTACAAA AGCAGGAGGT AGATTTAGCT TTAGTATAAA GACCCTAGCT 000400 000401 GTTCAAAAGT AGCTCAAAAT GTAGTAAGTT GCTTGTCACT AAGCAAGTAA TCAACAACTA TAAGGTAGAT GGTTGAGTCA 000480 000481 TGTACCCTCA TGGAGGATAC ATCAACTTCT AATTCATGTA GAATTTCCAG CAGAGAATAC ATCTCAGTAG TCACTGAAGC 000560 000561 ATTTAATTAG ACATTCTAGT ACCTATCAGA ATCCAAAGAG TACAGTTGAA TTATATATAT TATACATGTT CTAATAAATT 000640 000641 CTCTTTTGAA TCATTCAGTT CCTGAGAAGA TTATGTGTTC AGCTGAACTG CAGGAGAAAC TTAGTTTTTA CTGATTTCCC 000720 000721 TAGGGGTTGG TTTTTTGTTT GCTCTCTAGA ATAAATTGAT CCCACTGCTG TACATCAAAT ACTCAAGCGT TAGCACAAAA 000800 000801 GACATTCACC CTCAAAACAT TCAGATTTAA TGTCAACGTA TTACGCATTC ACTGATATTT TTTAAAATGT CAGTCTCTGT 000880 000881 ATTATCTTGC TTTAGTCTTT ATTGCATTAT CAAGACACCT GCATGCTATG AATGTTTTAA GCAGCTTTTA CCAAGAAAGT 000960 000961 CACGTTAGAT TTTATGAGTA GTCTCCTTTT CGTGTGCTGT CATGAGTATA TTGTTTGTAC AAATGTTAAC TTTTGACTGT 001040 001041 ATTATTTCTT TTGAACACAG AAAGCTGTTC AGGGGAAATT GCCTATGTTT ACTTTCTTGC ATATTCATAT TTGGTAGCTC 001120 001121 TTTACCATAC TGTTACTGCC TATTTAGGTT TACTAGTATT TTAAATCAGT TAATGTTAAA TACCGAAAGA TACTTGGTAT 001200 001201 ATATTAATCG TGAAAATTTG ATGAAGGGCA ATTTAAGGCC GCATTTTAAG TCACTATATG TAAATTTAAA CACCCACGTG 001280 001281 TTACCGCAGG ATCTCTTTAT CAAAATTTCA GTTGAAAGCA CCCGTTACCT TTCAGATTGC |
Predicted Small Protein
Name | NONHSAT054832_smProtein_866:967 |
Length | 34 |
Molecular weight | 3815.6147 |
Aromaticity | 0.121212121212 |
Instability index | 72.496969697 |
Isoelectric point | 9.16229248047 |
Runs | 7 |
Runs residual | 0.0279973649539 |
Runs probability | 0.0379791556263 |
Amino acid sequence | MSVSVLSCFSLYCIIKTPACYECFKQLLPRKSR |
Secondary structure | LLEEEELLLLLEEEELLHHHHHHHHHHLLLLLL |
PRMN | - |
PiMo | - |