NONHSAT054855
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT054855 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
812 nt |
Genomic location |
chr17-:54961463..54962274 |
Exon number |
1 |
Exons |
54961463..54962274 |
Genome context |
|
Sequence |
000001 CTGACCTTTT CCATGAATGT ATATTTGCTA CTTGTTCATT CGTTCTGTCA TCTGCTGGCA CTTGCTCTCT AGAAATGTGA 000080
000081 AAGGTCATGA GCTCATCCAG GACTTGCTAT CCTCCCTGCA TTTAGACAGT TCCTACCCAC CTGATGCTGG CCTGTCTGAT 000160 000161 GATGATGAGC CTCCCAATGC CAGCCTGCCC CCCGACCCGC CACTCCTCAC TGTGCCCCAG ATGCACAGTG TTTGTGACCA 000240 000241 GTGGCTGCAG GATGCCTTCC ACATCAGCCT CTGAAGAGCT GGGGGTGGGT GGGCATGCAC CCATGCAAAA GGCTCAGAGA 000320 000321 CTCCCCCTTC CATAAGCCCT TAGACTGCAG TGCTTGTGCC TTTCCCCATA CTGCCTCACC TCACAGGAGG GCCAGGCACC 000400 000401 ACTTGTATCT CTCAGATGCA AAACTGCCAA CCCCTTTCTC CTGTCTTGGG TTGGCTGGCA CTGGGGCGGG CACCTAGGGT 000480 000481 ATAGTCTCTG CCCATGGCAC TGGGCCTCCA TTTCTTCCAC ATATGTGTAC CTCCAGCTTG GCCAACCCTC AGCCTGGCTG 000560 000561 TGAGGCCCAA AGCATCTTCC CTTCCCCTTG GAGTCTCTGG GATTGGGATG AGTGTCTGGC TCCCATCTCC TTCTCCCCTT 000640 000641 TTGTGGCTAT TGGCAGCTGC TGGCTCAGGG GCATCCCACT TCCAGGCTCT GGGTTCCACT CTCAGGGAAG GGCTCTAGGA 000720 000721 CCCATTCCTA CACCCACCCA CGGCCAGGAG GGCCAAGGTC CCATGCTGGA TATTTAAATT TAGAGGCTGG CTTCCAGGGT 000800 000801 GCATAGATAA AT |
Predicted Small Protein
Name | NONHSAT054855_smProtein_143:334 |
Length | 64 |
Molecular weight | 6702.0401 |
Aromaticity | 0.015873015873 |
Instability index | 88.3682539683 |
Isoelectric point | 8.80767822266 |
Runs | 7 |
Runs residual | 0.0338516358925 |
Runs probability | 0.049499078911 |
Amino acid sequence | MLACLMMMSLPMPACPPTRHSSLCPRCTVFVTSGCRMPSTSASEELGVGGHAPMQKAQRL PLP |
Secondary structure | LHHHHHHLLLLLLLLLLLLLLLLLLLEEEEELLLLLLLLLLLLLLLLLLLLLHHHHHLLL LLL |
PRMN | - |
PiMo | - |