NONHSAT054857
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT054857 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
952 nt |
Genomic location |
chr17-:54967882..54968887 |
Exon number |
2 |
Exons |
54967882..54968661,54968716..54968887 |
Genome context |
|
Sequence |
000001 TGATTGTGTT GTGGGCGAGG AGGCGTTTCC ACCCCCTGGT GCCTATCAGG GCAGGGTGAC CTACTCCCCA TTGTTCTGGA 000080
000081 AATCTCCAGG CTGCTGGGCA GCTGGGCAGA GCTCTGGGAA GTGAAGTCAT GAGTGCCCGA TTCCTCTTAG AGAAAATCCA 000160 000161 TAGCTACTGT AGCCTTCAGA TCTTGGTGTT TTGAATTCTT ACTATAGATG TTTTTAAAGT TCCAAAGTCA TTGAGTTTCA 000240 000241 ATGTTACATA AACTCCATTA CCCGCATGTT GGGGCTTGAT CTCCTGGTTA TTATCTGTGC TTGAGGAAAC ACCCACAGCA 000320 000321 GTCTCTACCC AGAACAGTTT CCTAAAGAGG CATACCCTCT TCCTCCACTG GAAAATAGTG CGTTCCCTTC CTACCCTGCA 000400 000401 CACCCATCGC CCCCACATTG ATGGTTTTCA AACAGCAAAC TTTTCAGCTA AAGCTTCAAA CCATGATTGG AATCAGCCTG 000480 000481 TGTTGGATTT GTGATTCAGG GTCATGGTGA CCCTGATCCA GTTTGGGTGG AAATCCTTCC TAAGTATCAT AAGAAGCATC 000560 000561 TTGGCAGAGA TGCTTTGGTG GCAGCCATGA GCTTTGCTGG AGGCCTTGCT TCCCATAGCC TTGGCTGTGG GGCAAGGAAC 000640 000641 TCTGCCAGGC GAGGGGGATG CTGCCCTGGA TCAACAGAAG CCTGGTGGGT TTGCTCGTGT TAGAGTGTCC TGCCTTCTTA 000720 000721 CTGACAACTC TTCTCGGTGA TAGCCTCTCT TCCCTGGATT GTGACATATG GAATGACAGT GCAGGTACCA CCGAGGCTAG 000800 000801 CACAGTCAAG CCTCCAGCTA AGCTGGATCC CTGAAGCCTG CTATCATGCA GACAGGCTAT GCGGCTGCCT CGGACCATGC 000880 000881 TAGGCCACTT GCTGGGGTGT CAACCTACCA CCAAAGGGGT CTTTTAGCAA ACCTCATGGG GAACAGGAAC AT |
Predicted Small Protein
Name | NONHSAT054857_smProtein_503:589 |
Length | 29 |
Molecular weight | 3395.087 |
Aromaticity | 0.178571428571 |
Instability index | 46.2321428571 |
Isoelectric point | 8.49847412109 |
Runs | 6 |
Runs residual | 0.0110663983903 |
Runs probability | 0.00373903315079 |
Amino acid sequence | MVTLIQFGWKSFLSIIRSILAEMLWWQP |
Secondary structure | LEEHHHHLHHHHHHHHHHHHHHHHHHLL |
PRMN | LLLHHHHHHHHHHHHHHHHHHLLLLLLL |
PiMo | i??????????????????????????? |