NONHSAT055019
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT055019 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1008 nt |
Genomic location |
chr17-:57695919..57696926 |
Exon number |
1 |
Exons |
57695919..57696926 |
Genome context |
|
Sequence |
000001 GGGGAAGGGT CGGCTGATTG CTGCCAGAAA TGGAGAGCTC GTTTTAAGGA AATGCGGCGT CTCCTGGGAG TGAAGAGGCT 000080
000081 TTTGGGCCAC CTTGAGGCAT GACGGGTGCC GCTTCGTTTC CCTGCGACCG CTGCCTGTTT CGACTGAGCC CCTCACAGGA 000160 000161 GGACGTGGCG GGGGCAGACG GGCGCAGCCT CCCGCCCTCT CCGTGACTCA GGGAAACGGC CTCGCCGCAG AGCGCTCCCT 000240 000241 CGGCAGCTGG CTGCAGCACT CCTCCCCCGC CGGGCTTCAG AGTGGGTGGT TTCCTACAGC CTAGGGAGGG GGCCTGAAAC 000320 000321 GGGGTTTAAA ATCTTCCCTG CCCTCACACA AGCCCTTCTG ACTGTTGGAG AACCTGACGC GCGGATTCTA ACTAGAACTG 000400 000401 GCACTCTCTT CGGGTGTTAG ATAATTAACT CAAAGGACAG CGAAGGCCTT TTATGATGTC TTTCAAGCTG GCCTTATGAC 000480 000481 AGCTTTTCTT AACGTTTCTG CGGACATTTT GGCGGACTTG TGTCGGCCTA GCTCAGTGAT CAGTTTCGTT AAAGAATTTG 000560 000561 AGTATCCGAA CATTAAAGGA TTGGACCTAA ATTCTAGCAG GAGGATTTTT AGCCACATCA AATAATTTAC GTCTCAAAGA 000640 000641 TTTAGATAAT TAGGGTAAGG ATGCTTAGTA AAACCCGAAG GTTCCatcgc gccactgcac tccaacctgg gcgacagagc 000720 000721 gagactccgt ctcaaaaaaa aaacaaacaa aaaaaaaCCT GAAGGTTCCT GGAGGAAAGA GATGAACTAT TAGCCGTGTA 000800 000801 TTTCGGTGGG ACCACCTCAA CATAGGTTCC TGTAGGTTAG CAATGTAGAA ATGTAGCGCT TCAAAGCCGG AGCATCCTGT 000880 000881 CTTCAAAGAG CATGAAGGTA TCAACGGCAT TCATTGTCGA TTAATAATAA CCTTTCTGGT ACTTTCTTGC TAAAGTATAA 000960 000961 GCCATAATAA TATTTCATAA TCGCACCAAT ACAATAAAGG ATGAAAGA |
Predicted Small Protein
Name | NONHSAT055019_smProtein_98:205 |
Length | 36 |
Molecular weight | 3637.0429 |
Aromaticity | 0.0571428571429 |
Instability index | 87.5714285714 |
Isoelectric point | 4.68255615234 |
Runs | 5 |
Runs residual | 0.0382566585956 |
Runs probability | 0.0270976859212 |
Amino acid sequence | MTGAASFPCDRCLFRLSPSQEDVAGADGRSLPPSP |
Secondary structure | LLLLLLLLLLLLEEELLLLHHHHLLLLLLLLLLLL |
PRMN | - |
PiMo | - |