NONHSAT055042
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT055042 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
719 nt |
Genomic location |
chr17+:58022552..58024302 |
Exon number |
2 |
Exons |
58022552..58022879,58023912..58024302 |
Genome context |
|
Sequence |
000001 GGCTCAATGG AATTCTGCTT TCTTGAAGTG TGTGCCTCAC GAAATGGCTG GAAAGAAGTT AACGGGTCTA AAAATGAGGT 000080
000081 TGAGGACGTG GGAGAGTGTA CACATTGGTG GTTTTAGGTG TGCATCATTG TGTAGGTATG TCAGACTGAA CAACCCCATT 000160 000161 CTCTTGAGAT ACATGACAAA ATGCCATTCT GTAGTCCACT GTTACTGTCT TTCAGGGTTT TACATATGTG GCTCCATCTG 000240 000241 TACTTGAAAG TGTGAAAGAA AAGTTTTCCT TTGAACCAAA AATCCGATCA CCTCGAAGAT TTATTGGCAG CCCACGAACA 000320 000321 CCTGTCAGCC CAGTCAAATT TTCTCCTGGG GATTTCTGGG GAAGAGGTGC TTCGGCCAGC ACAGCAAATC CTCAGACACC 000400 000401 TGTGGAATAC CCAATGGAAA CAAGTGGCAT AGAGCAGATG GATGTGACAA TGAGTGGGGA AGCATCGGCA CCACTTCCAA 000480 000481 TACGACAGCC GAACTCTGGG CCATACAAAA AACAAGCTTT TCCCATGATC TCCAAACGGC CAGAGCACCT GCGTATGAAT 000560 000561 CTATGACAGA GCAATGCTTT TAATGAATTT AAGGCAAAAA AGGTGGAGAG GGAGATGTGT GAGCATCCTG CAAGGTGAAA 000640 000641 CGACTCAAAA TGACAGTTTC AGAGAGTCAA TGTCATTACA TAGAACACTT CAGACACAGG AAAAATAAAC GTGGATTTT |
Predicted Small Protein
Name | NONHSAT055042_smProtein_413:565 |
Length | 51 |
Molecular weight | 5601.4415 |
Aromaticity | 0.04 |
Instability index | 64.996 |
Isoelectric point | 8.21136474609 |
Runs | 7 |
Runs residual | 0.0246783625731 |
Runs probability | 0.0215131097485 |
Amino acid sequence | METSGIEQMDVTMSGEASAPLPIRQPNSGPYKKQAFPMISKRPEHLRMNL |
Secondary structure | LLLLLEEEELEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHLLLL |
PRMN | - |
PiMo | - |