NONHSAT055043
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT055043 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
564 nt |
Genomic location |
chr17+:58024939..58027781 |
Exon number |
2 |
Exons |
58024939..58025241,58027521..58027781 |
Genome context |
|
Sequence |
000001 TACTTGCAGT ACTGCTATGT GCTAAGCTTA ACTGGAAGCC TTGGAATGGG CATAAGTTGT ATGTCCTACA TTTCATCATT 000080
000081 GTCCCGGGCC TGCATTGCAC TGGAAAAAAA AATCGCCACC TGTTCTTACA CCAGTATTTG GTTCAAGACA CCAAATGTCT 000160 000161 TCAGCCCATG GCTGAAGAAC AACAGAAGAG AGTCAGGATA AAAAATACAT ACTGTGGTCG GCAAGGTGAG GGAGATAGGG 000240 000241 ATATCCAGGG GAAGAGGGTG TTGCTGTGGC CCACTCTCTG TCTAATCTCT TTACAGCAAA TTGCACAAGT ATTATCTCAG 000320 000321 TGGATTATCC GGAATAACAT CTGAAAGATG GGTTCATCTA TGTTTGTGTT TGCTCTTTAA ACTATTGTTT CTCCTATCCC 000400 000401 AAGTTCGCTT TGCATCTATC AGTAAATAAA ATTCTTCAGC TGCCTTATTA GGAGTGCTAT GAGGGTAACA CCTGTTCTGC 000480 000481 TTTTCATCTT GTATTTAGTT GACTGTATTA TTTGATTTCG GATTGAATGA ATGTAAATAG AAATTAAATG CAAATTTGAA 000560 000561 TGAA |
Predicted Small Protein
Name | NONHSAT055043_smProtein_167:343 |
Length | 59 |
Molecular weight | 6809.8598 |
Aromaticity | 0.051724137931 |
Instability index | 59.8568965517 |
Isoelectric point | 9.68890380859 |
Runs | 8 |
Runs residual | 0.0186623721106 |
Runs probability | 0.0305378908321 |
Amino acid sequence | MAEEQQKRVRIKNTYCGRQGEGDRDIQGKRVLLWPTLCLISLQQIAQVLSQWIIRNNI |
Secondary structure | LLHHHLLEEEEELLLLLLLLLLLLLLLLLEEEEEHHHHHHHHHHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |