NONHSAT055098
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT055098 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
606 nt |
Genomic location |
chr17-:58642101..58643032 |
Exon number |
2 |
Exons |
58642101..58642359,58642686..58643032 |
Genome context |
|
Sequence |
000001 agtTCAATTG CTGGTCGGTT CACTCCTGGA ACCTTCACTA ACCAGATCCA GGAAACCTTC TGGGAGCCAC AGCTTCTGGT 000080
000081 GGTTATTGAT TCCAACAATC CAACAACGAC CACCGGCCTG TCACAGAGGC AACTTATGTT AATCTTATCT ACCATCGCTC 000160 000161 TGTGCAACAC AGATTCTCCT TTGCGCTATG GGGACATTGC CATCCCATGC AACAACAAAG GAGCTTACTT ACGGGTTTGA 000240 000241 TATGGTGGAT GCTGGTTTGG GAACTTCTGT GCATGCATGG CACCATCTCC TGTGAACACT CATGGGAGCT CAGGCCTGAT 000320 000321 CTCTACTTTT ATAGAGATCC TAAAGAGATG AAAAGGAAGA GCAAGCTGTT GCTGAAAAAA AGCTGTGACC AAGGAGGAAT 000400 000401 TTCAGGGTAA ATGGACTGCT CCAGCTCCTG AGTTCACTGC TCCTCTGCCT GAGGGTGCAG ACTGATCTGA ATGTGGCAGG 000480 000481 TGCCCTCTGT GCCTATTCAG CAATTCCTTA CTGAAGATTG GAGAGCTCAG CCTGCCATGG AAGTCTGGTC TGCAGCTCCC 000560 000561 ACTGCTCAGG CCACTTGAAT GGGTAGGAAC AACCACCAAG TTGTCT |
Predicted Small Protein
Name | NONHSAT055098_smProtein_206:409 |
Length | 68 |
Molecular weight | 8000.3739 |
Aromaticity | 0.10447761194 |
Instability index | 55.2523880597 |
Isoelectric point | 8.93121337891 |
Runs | 9 |
Runs residual | 0.00898648120653 |
Runs probability | 0.0211289721094 |
Amino acid sequence | MQQQRSLLTGLIWWMLVWELLCMHGTISCEHSWELRPDLYFYRDPKEMKRKSKLLLKKSC DQGGISG |
Secondary structure | LHHHHHHHHHHHHHHHHHHHHHHLLLEELLLLLLLLLLLEEELLHHHHHHHHHHHHHHHH HLLLLLL |
PRMN | - |
PiMo | - |