NONHSAT055100
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT055100 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1681 nt |
Genomic location |
chr17+:58741954..58743635 |
Exon number |
1 |
Exons |
58741954..58743635 |
Genome context |
|
Sequence |
000001 TTGCTTTATA CTGAGCTTTT GAGTGTTCCC AATCTGAAAT TCAAAATGCT CTAATGAGCA TTTCCTTTGA GCATCATGCC 000080
000081 TGCTCTGAAA AAGTTTCTGA TTCTGGAGCA TTTTGGATTT TGGATTTTCA GATTAGGGAT GCTTAACCTG GATTAACATT 000160 000161 CTGTTGTGCC ATGATCATGC TTTACAGTGA GTGTATTTTA TTTATTTATT ATTTTGTTTG TTTGTTTGAG ATGGAGTCTC 000240 000241 ACTCTGTCAT CCAGGCTAGA GTGCAGTGGC GTGATCTCGG CTGACTGCAA CCTCTGCCTC CCGGGTTCAA GTGATTCTCC 000320 000321 TGCCTCAATC TCTCTCCCCA GAAGCTGGGA TTACAGGTGT GTGCCACCAC ACCCGGCTAA TTTTTTTTTT TTTTTTGAGA 000400 000401 TGGAGTCTAG CTCTGTCATC CAGGCTGGAG TGCAGTGGTG TGATCTCGGC TCCCTGCAAC CTCTGCCTTC TGGGTTCCTG 000480 000481 CGATTCTCCT GCCTCAGCCT CCTGAGTAGC TGAGATTACA GGCACGCGCC ACTGTGCCCA GCCAATTTTT GTATTTTTAG 000560 000561 TAGAGATGGG GTTTCACATG TCAGTCATGC TGGTCTTGAT CTCCTGACCT CGTGATCCAC CCGCCTCGAC CTCCCAAAGT 000640 000641 ACTGGGATTA CAGGCGTGAG CCACCGCATC CGGCCTGAGT TTTATGCTTT CAATGTATTT CTTACATTTC AGTTCAAGTG 000720 000721 ATTTTCATGT CTCAGCCTCC TGAGTAGCTG GAACTACAGG TGCGTGCCAC CATGCCTGGC TAAGTTTTGT ATTTTTAGTA 000800 000801 GAGATGGGTT TTCATCATGT TGGCCAAGAT GGTCTTGATC TCTTGACCTC ATGATCCACC AGCCTAGGCC TCCCAAAGTG 000880 000881 CTGGGATTAC AGGTGTGAGC CACCGTGCCC AGCCAACTAT GCCATTATTT AACCATGTCC ACACATTCTG GTTATTTTCA 000960 000961 ATATTTTGCA GAAGATAATT CTTGATCGGT GTGTCTTATG CCACAAGGAT TAAAATATGT ATTCATTGCT ACAAAACAAT 001040 001041 ATCTCGAAAT TTAGCAGTTT AAAACAACAA ATATTATCTC CAGTTTCTGA GCCTCAGAAA TCTGAGAGTG GTTTAGCTGG 001120 001121 GTGATAGTCT CGTGGTTTTG GTCAAGCTAC CAACCAGGGC TACAATCTTT CGAAGGTGTC ATTGGGGCTA GAAGATCTGC 001200 001201 TTCCCGCAAG ACTCACAGCT GTTGGCAGGA GACCTCAGTT TGTTGCCACA TGTTCCCCTC CAGAGGGCCT CTCACAACAT 001280 001281 GGCAGTTATT TGTCCCCAGA GCAAGCAACA CCGGAGGGCA AGGAAGAAGC CATGATGTTT TTTGTAACCT AGCCTCTGAA 001360 001361 AGTGTCATAC CAATTCTGTA TTTTGTTGGT CACACAGACC AAGTCAACTA CAACGTGGGA GACTCCTACA CAAGGCATGA 001440 001441 ATTCTAGGAG GTGGGCATTT TTAAGTGTCA TCTGGAAGGA GGCTGTCACA ACCTGGAAGT TAAAAGCATT GATATTCTGA 001520 001521 AATACAGCGT GTATAACATT GTTTTAGTAG GGTGTGCAAT AGTTATGTTT TGGTAATAGC ATTAATGAAC AATGTTATTT 001600 001601 TCATCTTCCA GACATCTGGA AGATTGCTCT AGTGGAGTAA AACATCTTAA TGTATTTTGT CCCTAAATAA ACTATCTCAC 001680 001681 T |
Predicted Small Protein
Name | NONHSAT055100_smProtein_170:283 |
Length | 38 |
Molecular weight | 4535.3534 |
Aromaticity | 0.189189189189 |
Instability index | 45.7621621622 |
Isoelectric point | 4.83099365234 |
Runs | 9 |
Runs residual | 0.0634763203571 |
Runs probability | 0.0162711731339 |
Amino acid sequence | MIMLYSECILFIYYFVCLFEMESHSVIQARVQWRDLG |
Secondary structure | LEEEEHHHHHHHHHHHHHEEELLLHHHHHHEEHHHLL |
PRMN | LHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLL |
PiMo | i???????????????????????????????????? |