NONHSAT055166

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT055166

Source

NONCODE4.0

Same with

,

Classification

sense

Length

3536 nt

Genomic location

chr17+:60689307..60692842

Exon number

1

Exons

60689307..60692842

Genome context

Sequence
000001 TGTCTCCTGA CACTTCATAT GGTGACAGAA TTTTCGCTTC CTCAGGAAGT TCACATGAGG CCATGGTTTG TAGATGGAGG 000080
000081 ACCGTGAAGT TAGATCGTTC CCATCCAAAC CAGCGAAGAC AAAGAGAGAT TTTTTTTTTT TCTGTTGGTC TTAGTGCTTT 000160
000161 GGGGGCAGGA GTATTTAGAG GTCATGCTTC CTTTTTCCTC CCTTCAGTAA TGGCTCAGCC CTTTCTGTCT GAGAAGGGAT 000240
000241 CGGTGGCAGC AGAGAGGTAC TTCTGTTGGT GCTTCTCCTT CCCTTGTGTT CTTTGGGTCT GCCTGGTGAT TTCTGAGGAA 000320
000321 GGCCTTAAGC CCCTTCTCTT TAGTTGATAT TTGCTCTGGG CCCTGGCAGC CGATAGAGAG CCTTAGGGTT CCCTCCAGGG 000400
000401 GTGCCAAGAC TATCTGCCTC TGTCTTCAAG AAACTCTCCT TTGCAGGCGT TTATTCGACG ATGCTTGGCC TACCGAAAGG 000480
000481 AGGACCGCAT TGATGTCCAG CAGCTGGCCT GTGATCCCTA CTTGTTGCCT CACATCCGAA AGTCAGTCTC TACAAGTAGC 000560
000561 CCTGCTGGAG CTGCTATTGC ATCAACCTCT GGGGCGTCCA ATAACAGTTC TTCTAATTGA GACTGACTCC AAGGCCACAA 000640
000641 ACTGTTCAAC ACACACAAAG TGGACAAATG GCGTTCAGCA GCGGGTTTGG AACATAGCGA ATCCGAATGG ATCTGATGAA 000720
000721 ACCTGTACCA GGTGCTTTTA TTTTCTTGCT TTTTTCCCAT CCATAGAGCA TGACAGCATC GATTCTCATT GAGGAGAAAC 000800
000801 CTTGGGCAGC TCCGGCCAGG CCTTGTAGGA AAAGGCCCCG CCCGAGGTTC CAGCGTCAAC GGCCACTGTG TGTGGCTGCT 000880
000881 CTGAGTGAGG AAAAAATTAA AAAGAAAAAC TGGTTCCATG TACTGTGAAC TTGAAAACTT GCAGACTCAG GGGGGTCCCT 000960
000961 GATGCAGTGC TTCAGATGAA GAATGTGGAC TTGAAAATAC AGACTGGGCT AGTCCAGTGT CTATATTTAA ACTTGTTCTT 001040
001041 TTCTTTTAAT AAAGTTTAGG TAACATCTCC TGAAAAGCTT GTAGCACAAA GGCTCAGCTG GGGATGGTGT TTGACTTCGG 001120
001121 AGGAAAAAAG TTGCTATTGC CCGTTAAAGG CACTAGAGTT AGTGTTTTAT CCCTAAATAA TTTCAATTTT TAAAAACATG 001200
001201 CAGCTTCCCT CTCCCCTTTT TTATTTTTGA AAGAATACAT TTGGTCATAA AGTGAAACCC GTATTAGCAA GTACGTGGCA 001280
001281 ATGTTCATTC CAATCAGATG CAGCTTTCTC CTCCGTCTGG TCTCCTGTTT GCAATTGCTT CCCTCATCTC AGTAGGGAAA 001360
001361 AAATTGAGTG GGAGTACTGA GATGTGTGGG TTTTTGCCAT TGGACAAAGA ATGAGGTTAG AAGACTGCAG CTTGGAGTCT 001440
001441 CTCTAGGTTT TCAACTATTT CTTCACAATT TGAACACTTG ACGGTTGTCC CTTTTAATTT ATTTGAAGTG CTATTTTTTT 001520
001521 AAATAAAGGT TCATCTGTCC ATGCAGTCCT CTTGGATTCT CTGAATGTAG TAACTATGAA GCTATGCCAA AGGTAGGCAG 001600
001601 AAAATGGGCT TGGGAGCCAG ACACTCCAGG GATCAGTAGT TCCTACCCAT AGTCTTTGTG TGCTTGCTAA ATGGTGTACA 001680
001681 TTTCTTGTTA ACCACGTTAT TAAAACTTGA TCAGCACATA AGCTTTCTTC TGTTAGATCT TTTGGCAGCA AACAACCTTC 001760
001761 CCCCCAAGCC TCTGAATTTT GTGGGTGTGT GGTGGTGTGT GTCTGTGTGT GCATGTACAC ACACACTTTG TCTAGCTCAC 001840
001841 TTTAAAAGAT TCATCAAATG GAATTTTAAA AATAATCTGA AAAGAAATAG ATATTTCAgg ccgggcctgg tggttcacgc 001920
001921 ctgtaatccc agcactttgg gaggccgagg tgggtggatc acgaggtcgg gagttcgaga tcagtctggt caacatggtg 002000
002001 aaacgccatc tctactaaaa atataaaaat tagcctggcg tggtggcgtg tgcctctagt cccagctacc cgggaggctg 002080
002081 aggcaggaga atttctggaa cccaggaggc ggaggttgca gtgagccgag atggcaccac tgcaatccag cctaggcaac 002160
002161 agaatgagac tctgtctcag aaaaaaaaaa aaaaaaaaaa ggagaaaTAG ATGTTTCAAA TATGAACATT CTTTTGGCAC 002240
002241 CAATTTTCTT TTTTAATTTG GTTGTTTCTG AGATGTATGA TCAACTGAAG ATGGAGCTGA AATGGGAGAC GGGTGGCCCC 002320
002321 ACCGTGCCCT TGAAACAGCA GAGCACTCCT CAGTAGAGAG GGAGGGAGCC AAGAGCCTGA ACATGTGGTC GCCAGCTTGG 002400
002401 AATGTTACTG ACATATGTGG CGAGGGCTTA GCCAGAAATA TTTAAAGATG TAGTATTCCG GCCTGTGAGT TGTCTGGGCA 002480
002481 GGGAGGGGGA GTCAGAAAGG GTAGAGAGCT CTCAAATAAC TCATGACTCT AGTGTTCCTT TCACATGTGA ACAGTGTCAC 002560
002561 TGATGACACA TTTTCTAGGA CCTTCGTTTG TTTTGTGGAC CTGCCTCAGT CTCCTCAGTA TCAGGCGATC TTAAGGGAAG 002640
002641 ATGGAGTGTT TCAAATTGGA GAGAAGTTCA TGGGTAGGTA TCGTCCTGTG GAATTCTGAA TGCAAGGAAG TCAACCCCAG 002720
002721 AGGCCTTGGT ACCCCCAGCT TTCTAAAACT ACTTTATTAC AATTtatatg tatatacaca tgcacatata aacgtgtgca 002800
002801 tttatgtatg tgtgtatAGT ACCTTTTTTA AAAAAACATT TCCTCCAAGC TGCTAAGCAA AGGGTCTCAC AGGTCGAGCA 002880
002881 CAGTGCTGAG AGGATGGTGT CTGCATAATG AAGACATGGA TGAAGCTGAG ACCGTGTTCA AACTCACTGA AAACAATGAA 002960
002961 GTTCTATTCC TTTTTTCTTC CTCTCCAATG ATCTTGCAGT TGATTTGTTT GTTTTTTAAT TTTTTAACAT TTTTTTAACG 003040
003041 TTGAAAAAAT GCTGCGTCTT TCTTTAAGCC TTCCCAGTAA CTTCCTGCCT TTTTTTTCCC CGTGGGCTTT TAAGTGAAGC 003120
003121 TGCAGGATTT TATCTTTCAA TCTGCCCTTT CTACCCTTGT CCTATTGAAA GGATGCCCTC TTCCCTTGCT TTTTTGGTCT 003200
003201 AGGGCCTGTT TGGAGCTAAC TAGGCTTGGC TGAGTCCGGG CAAGACCTTC TTCCGAGGCA TGGACAAGCC CCAGAGAACA 003280
003281 TGCAGAACAT TGACCTTTCC ATTGACTGTC TTTCAAGCAG CCAGTGAAAT CACTAAGTGG GGTTCTTCCA TGACATATTT 003360
003361 TGTTAATATG GGTTTCACTT TTTCCAAGAA TAGTCCCTTG TTGCCACAAT GTTGATTTAC TTTACACAAT GACAGTATGT 003440
003441 ATTAATTTGT AATTAAACCC ATCCAGATTG TTTTAGCCTT TTCCCAATGG GGTGGGGGAG GGAAGAAGGA TATTAAAATA 003520
003521 AGTTTTAAGA AGCAAA
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Predicted Small Protein

Name NONHSAT055166_smProtein_62:346
Length 95
Molecular weight 10780.5635
Aromaticity 0.159574468085
Instability index 45.3159574468
Isoelectric point 9.29852294922
Runs 13
Runs residual 0.00948196114709
Runs probability 0.057981057981
Amino acid sequence MVCRWRTVKLDRSHPNQRRQREIFFFSVGLSALGAGVFRGHASFFLPSVMAQPFLSEKGS
VAAERYFCWCFSFPCVLWVCLVISEEGLKPLLFS
Secondary structure LEEEEEEEEELLLLLLLLLLEEEEEEEELHHHHLLLLLLLLLHHHLLLLLLLLLLLLLLL
LLLEEEEEEEELLLLEEEEEEEELLLLLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL
LLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLL
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