NONHSAT055177
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT055177 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
536 nt |
Genomic location |
chr17-:60858301..60885686 |
Exon number |
4 |
Exons |
60858301..60858360,60865841..60865960,60879007..60879113,60885438..60885686 |
Genome context |
|
Sequence |
000001 GGACGCCCGG TAGCCGCCCC CACCGCCTCC GCCCCAGGCA AGGCCGGCCG GCGCCGCGGA AAGCAGCCTC ggggaaggag 000080
000081 gaggaagagg ggcaggtgta gggagtgaag aagcaaaaag aggaggagga agaggagCTC AGGGCCGTCC CCGCGCAATT 000160 000161 AATGGGCGGC TCCTGCGCCC TGGACCGGCC CGCCCGCCCA GCCCCTCGAC CCCTGTAGCC CCGGCAGGGG AGGAAGGGCA 000240 000241 GACCCACAGG TCAGGGATTA GGAATCATGT TGCATGACGC AAGGGACAGG CAGAAGTTCT TCAGCGATGT TCAGTATCTG 000320 000321 CGGGACATGC AGCATAAGGT GGACTCTGAG TATCAGGCTT GTCTGAGACG ACAGGAATAT AGAAGAGACC CAAATGAGAA 000400 000401 GAAACGCGAT CAGTTTTGGG GGCAAGAGAC AAGTTTTGAG AGATCCCGGT TTTCTAGCAG GTCATCTTCC AAACAGGCAC 000480 000481 CGGCGAGACC GCTGCTGGCC CAGAGGAGCT TGCTGTGATT GACAGAGGCA CGGAAG |
Predicted Small Protein
Name | NONHSAT055177_smProtein_266:517 |
Length | 84 |
Molecular weight | 10125.1786 |
Aromaticity | 0.10843373494 |
Instability index | 84.1807228916 |
Isoelectric point | 9.99285888672 |
Runs | 13 |
Runs residual | 0.0165997322624 |
Runs probability | 0.0324895030777 |
Amino acid sequence | MLHDARDRQKFFSDVQYLRDMQHKVDSEYQACLRRQEYRRDPNEKKRDQFWGQETSFERS RFSSRSSSKQAPARPLLAQRSLL |
Secondary structure | LLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHLLLLHHHHLLLLLLLLLEELL EELLLLLLLLLLLLHHHHHHLLL |
PRMN | - |
PiMo | - |