NONHSAT055232
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT055232 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense,sense |
Length |
602 nt |
Genomic location |
chr17+:61904820..61906900 |
Exon number |
3 |
Exons |
61904820..61905283,61905479..61905569,61906854..61906900 |
Genome context |
|
Sequence |
000001 GGATGCCGGC GGTCTCTGCT GAAGAGAGAA GATGGCGCTT GACGGACCAG AGCAGGTATG GCGGGTGCAG TGGCGGCCCG 000080
000081 GCAGGTTACG GGGCTGGGTG CGGAGCGAGC GTGATCTGAG TGGAGAGCGG GCCGGGGCAG GAGCGTCGGG TGGGTCGGAG 000160 000161 GTGCCTGGAC CAGTCCATGC TGGACGCTGC CTGCGACCGG ATCTGCTGTG TCAGCGCCGC CCTCGGTGAG TCAGGGCAAG 000240 000241 GCTGGGAGAG GAAGACGCGG TAGAAGCGGA GTGAGTGAGG GAAGCGATGG GCGCGGGAAT GGCCGGCCCA CGGGTCGCAG 000320 000321 GAGACGGGAC GCCAGTCCTT TGGCTCCGTT CCGCTGGCTC CTTCGTCagt actgacacct cgggcttgta gagcacttca 000400 000401 cgcagtgcaa agcgcccccc gtctatatca tatcgcctct cggtcctcct aaaagtcgta tgagACTCAC TCTGTGTCTT 000480 000481 CAGATGGAGC TGGAGGAGGG GAAGGCAGGC AGCGGACTCC GCCAATATTA TCTGTCCAAG ATTGAAGAAC TCCAGCTGAT 000560 000561 TGTGAATGAT AAGAGCCAAA ACCTCCGGAG GCTGCAGGCA CA |
Predicted Small Protein
Name | NONHSAT055232_smProtein_2:118 |
Length | 39 |
Molecular weight | 3874.2614 |
Aromaticity | 0.0789473684211 |
Instability index | 80.1342105263 |
Isoelectric point | 7.81146240234 |
Runs | 5 |
Runs residual | 0.0410318559557 |
Runs probability | 0.0363010068893 |
Amino acid sequence | MPAVSAEERRWRLTDQSRYGGCSGGPAGYGAGCGASVI |
Secondary structure | LLLLLHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLEEL |
PRMN | - |
PiMo | - |