NONHSAT055245
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT055245 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
830 nt |
Genomic location |
chr17-:61994854..61996028 |
Exon number |
3 |
Exons |
61994854..61994866,61995120..61995284,61995377..61996028 |
Genome context |
|
Sequence |
000001 TCTGAATGTG AGTATCGCCA TGTAAGCCCA GTATTTGGCC AATCTCAGAA AGCTCCTGGT CCCTGGAGGG ATGGAGAGAG 000080
000081 AAAAACAAAC AGCTCCTGGA GCAGGGAGAG TGCTGGCCTC TTGCTCTCCG GCTCCCTCTG TTGCCCTCTG GTTTCTCCCC 000160 000161 AGGCTCCCGG ACGTCCCTGC TCCTGGCTTT TGGCCTGCTC TGCCTGCCCT GGCTTCAAGA GGGCAGTGCC TTCCCAACCA 000240 000241 TTCCCTTATC CAGGCTTTTT GACAACGCTA TGCTCCGCGC CCATCGTCTG CACCAGCTGG CCTTTGACAC CTACCAGGAG 000320 000321 TTTGTAAGCT CTTGGGGAAT GGGTGCGCAT CAGGGGTGGC AGGAAGGGGT GACTTTCCCC CGCTGGGAAA TAAGAGGAGG 000400 000401 AGACTAAGGA GCTCAGGGTT TTTCCCGAAG CGAAAATGCA GGCAGATGAG CACACGCTGA GTGAGGTTCC CAGAAAAGTA 000480 000481 ACAATGGGAG CTGGTCTCCA GCGTAGACCT TGGTGGGCGG TCCTTCTCCT AGGAAGAAGC CTATATCCCA AAGGAACAGA 000560 000561 AGTATTCATT CCTGCAGAAC CCCCAGACCT CCCTCTGTTT CTCAGAGTCT ATTCCGACAC CCTCCAACAG GGAGGAAACA 000640 000641 CAACAGAAAT CCAACCTAGA GCTGCTCCGC ATCTCCCTGC TGCTCATCCA GTCGTGGCTG GAGCCCGTGC AGTTCCTCAG 000720 000721 GAGTGTCTTC GCCAACAGCC TGGTGTACGG CGCCTCTGAC AGCAACGTCT ATGACCTCCT AAAGGACCTA GAGGAAGGCA 000800 000801 TCCAAACGCT GATGGGGAGG CTGGAAGATG |
Predicted Small Protein
Name | NONHSAT055245_smProtein_269:406 |
Length | 46 |
Molecular weight | 5289.8374 |
Aromaticity | 0.155555555556 |
Instability index | 42.4022222222 |
Isoelectric point | 6.23822021484 |
Runs | 7 |
Runs residual | 0.00669191919192 |
Runs probability | 0.0112170994524 |
Amino acid sequence | MLRAHRLHQLAFDTYQEFVSSWGMGAHQGWQEGVTFPRWEIRGGD |
Secondary structure | LLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLEELLLEEEELLL |
PRMN | - |
PiMo | - |