NONHSAT055245

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT055245

Source

NONCODE4.0

Same with

,

Classification

sense

Length

830 nt

Genomic location

chr17-:61994854..61996028

Exon number

3

Exons

61994854..61994866,61995120..61995284,61995377..61996028

Genome context

Sequence
000001 TCTGAATGTG AGTATCGCCA TGTAAGCCCA GTATTTGGCC AATCTCAGAA AGCTCCTGGT CCCTGGAGGG ATGGAGAGAG 000080
000081 AAAAACAAAC AGCTCCTGGA GCAGGGAGAG TGCTGGCCTC TTGCTCTCCG GCTCCCTCTG TTGCCCTCTG GTTTCTCCCC 000160
000161 AGGCTCCCGG ACGTCCCTGC TCCTGGCTTT TGGCCTGCTC TGCCTGCCCT GGCTTCAAGA GGGCAGTGCC TTCCCAACCA 000240
000241 TTCCCTTATC CAGGCTTTTT GACAACGCTA TGCTCCGCGC CCATCGTCTG CACCAGCTGG CCTTTGACAC CTACCAGGAG 000320
000321 TTTGTAAGCT CTTGGGGAAT GGGTGCGCAT CAGGGGTGGC AGGAAGGGGT GACTTTCCCC CGCTGGGAAA TAAGAGGAGG 000400
000401 AGACTAAGGA GCTCAGGGTT TTTCCCGAAG CGAAAATGCA GGCAGATGAG CACACGCTGA GTGAGGTTCC CAGAAAAGTA 000480
000481 ACAATGGGAG CTGGTCTCCA GCGTAGACCT TGGTGGGCGG TCCTTCTCCT AGGAAGAAGC CTATATCCCA AAGGAACAGA 000560
000561 AGTATTCATT CCTGCAGAAC CCCCAGACCT CCCTCTGTTT CTCAGAGTCT ATTCCGACAC CCTCCAACAG GGAGGAAACA 000640
000641 CAACAGAAAT CCAACCTAGA GCTGCTCCGC ATCTCCCTGC TGCTCATCCA GTCGTGGCTG GAGCCCGTGC AGTTCCTCAG 000720
000721 GAGTGTCTTC GCCAACAGCC TGGTGTACGG CGCCTCTGAC AGCAACGTCT ATGACCTCCT AAAGGACCTA GAGGAAGGCA 000800
000801 TCCAAACGCT GATGGGGAGG CTGGAAGATG
[back to top]

Predicted Small Protein

Name NONHSAT055245_smProtein_269:406
Length 46
Molecular weight 5289.8374
Aromaticity 0.155555555556
Instability index 42.4022222222
Isoelectric point 6.23822021484
Runs 7
Runs residual 0.00669191919192
Runs probability 0.0112170994524
Amino acid sequence MLRAHRLHQLAFDTYQEFVSSWGMGAHQGWQEGVTFPRWEIRGGD
Secondary structure LLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLEELLLEEEELLL
PRMN -
PiMo -