NONHSAT055263
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT055263 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
907 nt |
Genomic location |
chr17-:62083299..62097992 |
Exon number |
2 |
Exons |
62083299..62084095,62097883..62097992 |
Genome context |
|
Sequence |
000001 AGAAGACTGA ATAAGCCGTG AACTGGGCAG CTGTGACACG CGCACCTTGT CACCTTGTCA CCAATTTCCT GCCCGGGATC 000080
000081 CCAGAGCTAC CCTTCTTGGA GCCCACAGGG GCAGCCCTTG GCTGGTCCCT GCGAGCCCGT GGAGACTGCC AGAGATGTCC 000160 000161 TCTTTCGGTT ACAGGACCCT GACTGTGGCC CTCTTCACCC TGATCTGCTG TCCAGGTAAG CCAGTTTCCT GGGGTTCCTG 000240 000241 ATTTGGCACA TGCCAGCCGA GAGGGTGGGG GTGCCCTGTT CCCTGTGGCT TCAGGTGGAA GAGAAGTCCC AAAAGTTGCT 000320 000321 GAGGTTCTTA GGtttttttg ttttgtttta agacagggtc tcggtctatc acccaggctg gagtacagtg gcatgatcat 000400 000401 ggctcactgc acctccctgg gctcgggtga tcctcccacc tcagcctcct gagtagctgg gatcacaggt gagagccacc 000480 000481 atgcccagct aatttttgta ttttttgtag agatggcagg ggctggtctc gaactcctgg actcaagtga tccacccgcc 000560 000561 ttggtctccc aaagtgctgg gattacaggc atgagccacc atgcccagcc TGCTGAAGCt ttttaaattt tttattttta 000640 000641 ttataggcag gttcctgttc tgttgcccag gctggagtgc agggtgtgat catagctcac tgcagcctcc aactcctggg 000720 000721 ctcaacaatc ctcctgcccc agcctttgca ctgctggccc ccttcccctg gatcactgcc cccaagtatc tgcagggcgt 000800 000801 gccacgcccc tgcatgcctt tgcccacaga gtcaccatct gggtgaggcc ttcattgagc acagtattta aagtggcctc 000880 000881 acccccactc cctgctccct ttctcgg |
Predicted Small Protein
Name | NONHSAT055263_smProtein_512:625 |
Length | 38 |
Molecular weight | 3665.0264 |
Aromaticity | 0.027027027027 |
Instability index | 66.3702702703 |
Isoelectric point | 4.29962158203 |
Runs | 7 |
Runs residual | 0.009422266303 |
Runs probability | 0.0394680394681 |
Amino acid sequence | MAGAGLELLDSSDPPALVSQSAGITGMSHHAQPAEAF |
Secondary structure | LLLLLEEELLLLLLHHHHHHLLLLLLLLLLLLHHHLL |
PRMN | - |
PiMo | - |