NONHSAT055537
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT055537 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
685 nt |
Genomic location |
chr17-:66422067..66423710 |
Exon number |
2 |
Exons |
66422067..66422316,66423276..66423710 |
Genome context |
|
Sequence |
000001 gcctggccaa catggtgaaa cccagtctct actaaaaata caaaaattag ccaggcgctg tggtgggtgc ctgtagtcgc 000080
000081 agctactcgg gaggctgagg caggagaatc gcttgaaccc aggaggcgga ggttgcagtg agccgagatt gcgccactgc 000160 000161 actccagcct gggcaataga gcaagaccct gcctcaaaaa taaataaaTA ACCCACAGAG CTGAGCACAG GCTTCTTCAT 000240 000241 GCTTTTCCTT TGGAAGGTGT CCTAGATATA TGATGATTTC TTTTTTCTTT CACCTCCTCT TGATTGTCAC AAGTAGCTTG 000320 000321 CTTGGCTCAG GAACAACAGA AGAGAATAAA GAAAATGACC TCAGACCTTC CTTACCTCAG TCTTATGCAG CGACCGTAGC 000400 000401 CAGACCAAGT GCATCTTCAG CCTCCACGGT GCCAGGTTAT TCTGAGGACG GCGGGGCGCT GCGAGGAGAA GTTATTCCTG 000480 000481 AACATGAGTT TGCGACGGGA CCAGTGTGTC TTGATGATGA GAATGAGTTT CCTCCTGTGA GCATTAGGAA CCCGTAACTG 000560 000561 GGCGGCTCAG TCTGTGTGCT TAGAAGGAAA CCTTCGCCTC ATACGAGAGG CAGAGTCCCT TTCCCTGTTT TCTAATCTAT 000640 000641 AACAACTAAT TCTCTGCTCT AGTATTTGGA AAGCCATAGG ATATT |
Predicted Small Protein
Name | NONHSAT055537_smProtein_269:556 |
Length | 96 |
Molecular weight | 10168.2015 |
Aromaticity | 0.0736842105263 |
Instability index | 57.1315789474 |
Isoelectric point | 4.40850830078 |
Runs | 12 |
Runs residual | 0.00273518441774 |
Runs probability | 0.0489680857328 |
Amino acid sequence | MMISFFFHLLLIVTSSLLGSGTTEENKENDLRPSLPQSYAATVARPSASSASTVPGYSED GGALRGEVIPEHEFATGPVCLDDENEFPPVSIRNP |
Secondary structure | LEEHHHHHEEEEEELLLLLLLLLLLLLLLLLLLLLLHHHHEEEELLLLLLLLLLLLLLLL LLEEEEEEELLLLLLLLLEELLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |